Paraburkholderia edwinii: KZJ38_10260
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Entry
KZJ38_10260 CDS
T07588
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pew
Paraburkholderia edwinii
Pathway
pew03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KZJ38_10260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pew03400
]
KZJ38_10260
DNA repair and recombination proteins [BR:
pew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KZJ38_10260
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ku
Glyco_tranf_2_3
DUF3438
Motif
Other DBs
NCBI-ProteinID:
QYD70628
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All DBs
Position
1:2306674..2307669
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AA seq
331 aa
AA seq
DB search
MAHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRSIDPIGYKQINKRTGKEVAREN
IVRGFEYEKGKYVVMSDAEIRSANPESTQTVDILAFVEAPEISFLYLDTPYYLTPDRKGE
KVYALLREALRESGKVGIANVVMHNKQHLAALIPIGPVLALNTLRWAGEVRSYDELKLPD
ENRKKAGVTPRELEMAKKLIDDMSDTWDPSAYHDTFHDDIMALVDRKIGEGKTEEIGEVE
EPAETRPSADILDLSELLKRSLGKGKATRKTAAKATGKATAKSARARANGNEEADDDAEE
EARPAPRRAAKSKTPARRTASSPSARKRRAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcacatatgatctggaagggcgcaatcagcttcggtctcgtgcacgtgccggtgcag
ctgtacccggcgacgcaatcggagaaggtcggctttaatctgctcgacaagcgctcgatc
gacccgatcggctacaagcagatcaacaagcgcaccggcaaagaggttgcgcgcgagaac
atcgtgcgcggcttcgagtacgagaagggcaagtatgtcgtgatgtccgatgcggaaatt
cgttctgcgaacccggaatcgacgcagacggtcgacattctcgcgttcgtcgaagcgccg
gaaatctcgttcctgtatctcgatacgccttattacctgacgcccgatcgcaagggcgaa
aaagtctatgcgctcctgcgcgaggcgctcagggagagcggcaaggtcggcattgcgaac
gtcgtgatgcataacaagcagcatcttgccgcgctgattccgatcgggccggtgctcgcg
ctgaatacgttgcgctgggccggcgaggttcgatcgtacgacgaactgaaactgccggac
gaaaatcgcaagaaggccggcgtcacgccgcgcgaactcgagatggcgaaaaagctgatc
gacgatatgagcgacacgtgggacccgtccgcgtaccacgacacgtttcacgacgacatc
atggcgctcgtcgaccgcaagatcggcgagggcaagaccgaggaaatcggcgaggtcgag
gagccggccgaaacgcggccgagcgctgacattctcgatctgtcggagctgctcaagcgc
agcctcggaaaagggaaggccacgcggaagacggcggcgaaagcgacaggcaaagccaca
gcgaagtccgcgcgtgcgcgcgcgaacggcaacgaggaagccgatgatgatgcggaagaa
gaagcccgtcccgcaccgcgccgcgccgcaaagagcaagacgcctgcgcggcgaaccgca
agcagtccgagcgcgcgcaaacgccgcgctgcctag
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