KEGG   Paraburkholderia edwinii: KZJ38_10260
Entry
KZJ38_10260       CDS       T07588                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pew  Paraburkholderia edwinii
Pathway
pew03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KZJ38_10260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pew03400]
    KZJ38_10260
DNA repair and recombination proteins [BR:pew03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KZJ38_10260
SSDB
Motif
Pfam: Ku Glyco_tranf_2_3 DUF3438
Other DBs
NCBI-ProteinID: QYD70628
LinkDB
Position
1:2306674..2307669
AA seq 331 aa
MAHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRSIDPIGYKQINKRTGKEVAREN
IVRGFEYEKGKYVVMSDAEIRSANPESTQTVDILAFVEAPEISFLYLDTPYYLTPDRKGE
KVYALLREALRESGKVGIANVVMHNKQHLAALIPIGPVLALNTLRWAGEVRSYDELKLPD
ENRKKAGVTPRELEMAKKLIDDMSDTWDPSAYHDTFHDDIMALVDRKIGEGKTEEIGEVE
EPAETRPSADILDLSELLKRSLGKGKATRKTAAKATGKATAKSARARANGNEEADDDAEE
EARPAPRRAAKSKTPARRTASSPSARKRRAA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcacatatgatctggaagggcgcaatcagcttcggtctcgtgcacgtgccggtgcag
ctgtacccggcgacgcaatcggagaaggtcggctttaatctgctcgacaagcgctcgatc
gacccgatcggctacaagcagatcaacaagcgcaccggcaaagaggttgcgcgcgagaac
atcgtgcgcggcttcgagtacgagaagggcaagtatgtcgtgatgtccgatgcggaaatt
cgttctgcgaacccggaatcgacgcagacggtcgacattctcgcgttcgtcgaagcgccg
gaaatctcgttcctgtatctcgatacgccttattacctgacgcccgatcgcaagggcgaa
aaagtctatgcgctcctgcgcgaggcgctcagggagagcggcaaggtcggcattgcgaac
gtcgtgatgcataacaagcagcatcttgccgcgctgattccgatcgggccggtgctcgcg
ctgaatacgttgcgctgggccggcgaggttcgatcgtacgacgaactgaaactgccggac
gaaaatcgcaagaaggccggcgtcacgccgcgcgaactcgagatggcgaaaaagctgatc
gacgatatgagcgacacgtgggacccgtccgcgtaccacgacacgtttcacgacgacatc
atggcgctcgtcgaccgcaagatcggcgagggcaagaccgaggaaatcggcgaggtcgag
gagccggccgaaacgcggccgagcgctgacattctcgatctgtcggagctgctcaagcgc
agcctcggaaaagggaaggccacgcggaagacggcggcgaaagcgacaggcaaagccaca
gcgaagtccgcgcgtgcgcgcgcgaacggcaacgaggaagccgatgatgatgcggaagaa
gaagcccgtcccgcaccgcgccgcgccgcaaagagcaagacgcctgcgcggcgaaccgca
agcagtccgagcgcgcgcaaacgccgcgctgcctag

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