Pedobacter endophyticus: IZT61_00980
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Entry
IZT61_00980 CDS
T07452
Name
(GenBank) ATP-dependent DNA ligase
Organism
pex
Pedobacter endophyticus
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
mRNA_cap_enzyme
LysM
Motif
Other DBs
NCBI-ProteinID:
QPH39890
UniProt:
A0A7S9PZF5
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Position
complement(217445..219034)
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AA seq
529 aa
AA seq
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MKRFAKLIQQLELSNKTNDKIAALVDYFNYADDKDKVWVIALFTGKKPKRPIKSALIKYW
AIEITETPEWLFSESYSNVGDLSETIALLLPPAEKTSDFQLHKWIEDLHDLDGKDDETKK
EFILNAWNTLETQERFIFNKLISGNFRIGVSNKMLVNALAKQSSLDSAQIMHSIMGKWNP
YEITFNELINGIHVNTDNSWPYPFCLAYALEQEPDQLGDITDWQAEWKWDGIRGQIVKRN
GELFIWSRGEELVTEQFPELHFLIDVLPDGVVLDGEILAVQDKQVLSFSTLQQRLNRKTI
SKKQLEDAPIGFFVYDILEFEASDFREQPLSERRKVLEQLIGNLQESAVVLSPVINCKSW
AELAALRQTSRSINSEGIMLKKLSSHYHSGRKRGDWWKWKINPYTVDAVMIYAQKGSGRR
ANFFTDYTFAVRDGENLVTIAKAYSGLTDKEIKEVNSFVTKNAIEKFGPVRTVKPELVFE
IAFEGIAESKRHKAGLALRFPRILRWRKDKKAAEINTLEDLRQLLQSTL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttcgccaaattgattcaacagctcgaactgagcaataaaaccaacgacaag
attgccgcattggttgattattttaactatgccgacgataaggacaaggtttgggtaatt
gcattgtttaccggaaaaaagcctaaacgccccattaaatcggcgttgattaaatactgg
gccattgaaattaccgaaacacccgaatggctgttttctgaaagttattcaaatgttggc
gatttaagtgagaccattgccctgctcctgccgccggccgaaaaaacttctgattttcag
ttacataaatggattgaggatttacacgatcttgatggaaaagatgatgagaccaaaaaa
gagtttattcttaatgcctggaacacgctcgaaacgcaagaacgcttcatctttaataaa
ctgatttcagggaatttcagaattggtgtttctaacaaaatgctcgtaaatgcgctggca
aaacaaagcagtttagatagcgcacaaattatgcacagcattatgggcaaatggaatcca
tacgagattacctttaatgagctcatcaatggcatccatgtaaataccgataactcatgg
ccttatccgttttgtttggcctatgctttagagcaagaaccagatcaattgggcgatatt
acagattggcaggccgaatggaaatgggatggcattcgcgggcaaatagtaaaacgtaac
ggcgaattatttatttggagccgcggcgaggaactggttaccgagcagtttcccgaatta
catttcctgatcgacgttttgcccgatggcgtagttttagatggagaaattttggccgta
caagataaacaggtgctatcctttagcactttgcaacaacgcttaaaccgcaaaacgatc
agcaaaaaacagcttgaagatgcaccaatcggcttttttgtttatgatattttagaattt
gaagccagtgatttccgcgagcagcccctgagcgaaaggagaaaagtgctcgaacaacta
attggcaatttgcaggaaagtgctgtggtactttcgccggtaattaactgtaaaagctgg
gcagaattggccgcccttcgccaaacatcacgctccattaacagcgagggaataatgctt
aaaaagctaagctcacattatcacagcggcagaaagcgtggcgactggtggaaatggaaa
attaatccctacaccgttgatgcggttatgatttacgcccagaaaggaagcggtagacgg
gcaaatttctttaccgattatacgtttgccgttcgcgatggcgaaaatctggttaccatc
gccaaagcgtattctggcctgacggataaggaaattaaggaggtaaactcttttgtaacc
aaaaatgcaattgaaaaatttggccccgtacgaaccgtgaagcccgaactggtctttgaa
atcgcatttgaagggattgccgagagcaagcggcacaaagcaggcttggcgcttcgtttt
ccgcggattttgcgctggagaaaagataaaaaagccgccgaaattaatacactggaagat
ttaaggcagttgctgcaatcgactttataa
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