Pantoea eucalypti: EE896_04055
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Entry
EE896_04055 CDS
T06282
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pey
Pantoea eucalypti
Pathway
pey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EE896_04055 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pey03400
]
EE896_04055 (recD)
Enzymes [BR:
pey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EE896_04055 (recD)
DNA repair and recombination proteins [BR:
pey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EE896_04055 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecD_N
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
UvrD_C
nSTAND3
DEAD
AAA_28
ResIII
PhoH
CbiA
T2SSE
AAA_33
DO-GTPase1
TrwB_AAD_bind
MukB
AAA
AAA_24
SRP54
Flagellin_IN
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QGF26072
LinkDB
All DBs
Position
855588..857429
Genome browser
AA seq
613 aa
AA seq
DB search
MSDMLSLLQQAVEKRLLRPLDIQFAQLVVPESQPARLLAAACVSAEAGEGHVCFPLSNLC
EAHLFAGRQPALAQAIWQAAGAPDDWLSHFADWPAVSDGSRVTPLVLSNQRLYLHRLWQS
EGRVVDFFAAHEVKTAFDIRAAGDVLNSLFDDQPENWQKIAAAVALTRKTAVISGGPGTG
KTTTVAKLLAALIRLNPGALRIQLAAPTGKAAARLTESLGRALQDLAVSDEERQRFPAEA
TTLHRLLGAQPDTQRLRYHAGNPLHLDVLVVDEASMVDLSMMAKLIAALPAHARVVFLGD
RDQLASVEAGAVLGDICRCTESGYSLARAEQLAQLTGCTLQGSDDAQAPAVRDSICLLQK
SYRFDAASGIGQLAKAINQGDADQVRAVFAAAHKDVSYQPLNSAEAYQGMLDEVAQGYQP
FLQLIRQHAPPAEIITAFGRYQLLCALRDGPFGVQGLNQRIEQRLMQLQRIRRPGMGSRW
YEGRPVMITRNDSALGLFNGDIGITLRDEEGNLKVFFPLPDGSIKAIQPSRLPSHETAWV
MTVHKSQGSEFDHTALVMPTQFLPVLTRELVYTAITRARKQLTIYSEPGVFQRAVQQQTQ
RRSGLVERLAETR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatgctgagtctgctgcagcaggcagtagagaagcgtctcctgcgtccgctt
gatattcagtttgcacaactcgtggtgccggaatcacagcctgcgcggctgctcgctgcc
gcctgcgtcagcgctgaggccggtgaagggcacgtctgttttccgctgagcaatctctgt
gaggcgcacctgtttgccggacgtcagcctgcgctggcccaggcgatctggcaggctgct
ggcgcgccggatgactggttatcacacttcgctgactggccggcggtgagtgatggcagc
cgggtgacaccactggtgctcagcaaccagcgtctatatctgcatcggctttggcaaagc
gaaggccgcgttgtcgatttttttgctgcccatgaagtgaaaaccgcgtttgatatccgt
gccgcaggagatgtccttaacagcctgtttgacgaccagccagagaactggcagaaaatt
gctgcagcagtggcgctgacccgcaaaacagcggtcatttccggcgggccaggcaccggc
aaaaccaccaccgtagcgaaactgctcgccgccctgattcgactgaatccgggcgcgctg
cgcatccagctggcggcaccgacgggcaaagctgccgcgcggctgaccgagtcactgggc
agggcactgcaggatctggccgtcagcgacgaagaacggcagcgttttcctgcggaagcc
actacgctgcatcgcctgctgggcgctcagccggatacccagcggctacgctaccatgcc
ggtaatccgctgcatctggatgtgctggttgtcgatgaagcgtcgatggtcgatctctca
atgatggcaaaactgatcgccgcgctgcctgcccatgcccgcgtagtgtttctgggcgat
cgcgatcagctggcctctgttgaagccggtgcggtgctgggagatatctgccgctgcacg
gaaagcggctacagcctggcgcgggcagaacagctcgcccagctgaccggctgcacgttg
cagggcagtgacgatgcgcaggcaccagcagtgcgcgacagcatctgcctgctgcaaaag
agttatcggtttgacgccgcatccggcatcggccagctggcaaaagcgattaatcagggt
gatgccgaccaggtcagagcggtgtttgcagcggcccataaagatgtcagttaccagccg
ctgaacagcgcagaagcctatcagggaatgctggacgaagtcgcacagggctaccagccc
ttcctgcagctcatcaggcagcacgcaccacccgctgagatcataaccgcttttggtcgt
tatcagcttttgtgcgcgttacgtgacggaccctttggcgttcagggtctgaaccagcgt
attgagcagcgactgatgcaactgcagcgcatccggcgtcctggcatgggtagccgctgg
tatgaaggtcgtccggtgatgattacccgaaacgacagcgcactcggcctgtttaatggc
gatatcggcattacgctgcgggatgaagagggcaacctgaaagtctttttcccgctaccc
gatgggtcgatcaaggcaattcagccgagccggttgccttcgcatgaaaccgcctgggtg
atgacggtgcataaatcgcaggggtcggagtttgatcacaccgcgctggtgatgcccacg
cagtttctgccggttctgacccgtgaactggtctataccgcgattacccgtgcgcgtaaa
caactgactatttacagtgaacctggcgtgtttcagcgtgccgtgcagcagcaaacgcag
cggcgcagcggtctggtagagcgactggcggaaacgcgctga
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