KEGG   Pseudomonas eucalypticola: HWQ56_22410
Entry
HWQ56_22410       CDS       T07251                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pez  Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:pez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pez03400]
    HWQ56_22410
Enzymes [BR:pez01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HWQ56_22410
    5.6.2.6  RNA 3'-5' helicase
     HWQ56_22410
DNA repair and recombination proteins [BR:pez03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HWQ56_22410
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QKZ06377
UniProt: A0A7D5D9X7
LinkDB
Position
5039243..5041681
AA seq 812 aa
MPDHARHWFAHQHWKPFAFQKQVWAAVKAGQSGLLHASTGAGKTYALWFAALQQFARAGS
RTAPLTVLWITPMRALAADTQRALQAPLDDLQLPWSLGLRTGDTSSAERARQGRRLPTTL
ITTPESLTLLLAREQARTEFASLRMVVVDEWHELIGNKRGVQLQLALARLRRWQPELIVW
GISATLGNQAHAQDVLLGPGEGVSVQGADAKRIEVDTLLPGAIERFPWGGHMGLRMLDQV
VAEIDSSSSCLVFTNTRAQAEIWFQSILDARPDWAGIIALHHSSLARETRDWVERALKQG
ELKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPGRASRVTLVPTHSL
ELVEAAAAEQAVADRQIEPRQSPHKPLDVLVQHLVTMALGGGFRPDELLPEVRSAWAYRD
LTDDEWQWALAFVRHGGHSLTAYPDYRRVEPDEQGVWRVPDARLARRHRMSIGTIVSDAS
LQLKFWSKGGGGRSLGSVEEGFIARLRPGDGFLFAGRQLELVRVENMTAYVKRSTAKKAA
VPRWNGGRMPLSSELADALVVQLGLAAQGEYHSAPMRAVRPLLEVQQHWSALPTPATLLA
ETLKSREGWHLFLYPFAGRQVHLGLASLLASRMSRQQPLTFSMAVNDYGFELLSATAVDW
AQWLNGALLSPDDLLADVVASLNAGELAQRRFREIARISGLVFGGYPGSQKSTRQVQASS
SLFFEVFKQYDAGNLLLTQAQEEVLRQELDVQRLAQTLTRIQGLRLDLHALKRATPLAFP
LLVERFRESLSSEKLADRIARMVGELERAADQ
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgcccgatcacgcccgccattggttcgcccaccaacactggaagcccttcgcgttccag
aagcaggtctgggcagcggtgaaagcgggacaatccgggttgctgcatgccagtaccggc
gccggcaagacctatgcgctatggttcgcggccctgcagcagttcgccagggccggcagc
cgcaccgcgccgctgacggtgttgtggatcacgcccatgcgcgccctcgccgccgacacc
caacgcgcgctgcaagcgcccctggacgacctgcaactgccttggagcctgggcctgcgc
acaggcgacaccagcagtgcagagcgtgcccgccagggccggcgcctgccgaccaccctc
atcaccactccggaaagcctgaccctgctgctggctcgcgagcaggcccgcaccgagttc
gccagcctgcgcatggtggtcgtggacgagtggcacgaattgatcggcaacaaacgcggc
gtgcagctgcaattggctctggcgcgcctgcgccgctggcagcctgagctgatcgtgtgg
ggtatttccgccacattgggtaaccaggcccatgcccaggatgtgctgctgggcccgggc
gaaggggtcagcgtgcagggcgccgacgccaagcggatagaagtcgataccctgctgccc
ggcgccatcgagcgttttccctggggtggccacatgggcttgcgcatgctcgaccaggtg
gtggccgaaatcgactccagcagcagttgcctggtgttcaccaacacccgcgcccaggcg
gaaatctggtttcagtcgatccttgacgctcgtcccgactgggccggcatcattgccctg
caccatagttccctggcccgggaaacccgtgactgggtggagcgggcactcaagcagggt
gaactcaaggccgtggtctgtacgtcgagcctggacctgggggtggatttcctgccagtg
gaacgtgtgctgcagatcggctcagccaagggcgtggcgcggctcatgcagcgcgccggc
cgttccggccacgcccccggccgcgcttcgcgggtcaccctggtgcccacccacagcctg
gaactggtggaagcggccgccgccgagcaggccgtggccgaccgccagatagaaccgcgc
caatcgccccacaaacccttggacgtgctggtgcaacacctggtgaccatggccctgggg
ggcggtttccggcctgacgagctgctgccggaggtgcgcagcgcctgggcctaccgggac
ctcaccgatgacgagtggcaatgggccctggcatttgtgcgccatggcggtcattcgctg
accgcctaccccgactaccggcgtgtggagcctgacgaacagggcgtgtggcgggtgcct
gacgcaaggctggcgcgccgccaccgcatgagcatcggtaccatcgtcagcgatgcgagc
ctgcaactcaaattctggagcaagggcggtggcggccgctcgctgggcagcgtggaggaa
ggcttcatcgcccgcctgcgccccggcgacggcttcctgttcgccggccggcaactggag
ctggtgcgggtggaaaacatgaccgcctacgtcaagcgcagcaccgcgaaaaaagccgcc
gtgccgcgctggaatggcgggcgcatgccgctgtccagcgagctggccgatgccctggtg
gtgcaactgggcctggctgcccagggggagtaccacagcgcgcccatgcgggccgtgcgc
ccgctgctggaagtgcagcaacactggtctgcgttgccgacccccgccaccttgctggct
gaaaccctgaagtcccgggaaggctggcacctgttcctctaccccttcgccgggcgccag
gtgcaccttggcctggccagcctgctggcctcacgcatgagccgccagcagccgctgacc
ttctccatggcggtcaatgactacggcttcgaactcctcagcgcgacggccgtggattgg
gcgcagtggctcaatggcgccctgctcagcccggacgatttgctggcagacgtggtggcc
agcctcaacgccggtgaactggcgcaacgacgttttcgggagattgcccgtatttccggc
ctggtcttcgggggttaccctggttcgcagaaaagcacccgtcaggtgcaggcgtccagc
agcctgttcttcgaggtcttcaagcaatacgacgccggcaacctgctgttgactcaggct
caggaagaggtactgcgccaggagctggatgtgcagcgcctggcccagacactcacgcgc
atccagggcctgcgcctggacctgcacgcactcaagcgggcgaccccgctggcgtttccg
ctgctggtagaacgcttccgggaaagcctgagctccgaaaaactcgccgaccgaatcgcg
cgcatggtcggtgaactcgaacgggcggccgaccagtga

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