Plasmodium falciparum 3D7: PF3D7_1314900
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Entry
PF3D7_1314900 CDS
T00095
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03022
Basal transcription factors
pfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PF3D7_1314900
09124 Replication and repair
03420 Nucleotide excision repair
PF3D7_1314900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfa03021
]
PF3D7_1314900
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_1314900
Transcription machinery [BR:
pfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PF3D7_1314900
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PF3D7_1314900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Tfb4
Motif
Other DBs
NCBI-GeneID:
813966
NCBI-ProteinID:
XP_001349885
PlasmoDB:
PF3D7_1314900
UniProt:
Q8IEG6
LinkDB
All DBs
Position
13:join(632336..632365,632575..632659,633034..633169,633402..633492,633647..634510)
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AA seq
401 aa
AA seq
DB search
MQNPQNSENKVIFVEDVVRDFDENEIFEEITGKFTWEQDVERSWNLLVENNGVLQHVSQE
NNENENKEKYRKNQGSSLRKGIFRHIIILFDMSSSMKERDLKPDRINVALECVESFLKNF
FFKNPVGHVGVVALKNSSAKLIQPFTSNVDDILNSILKERTAGLQGSPSLEEGLQIAHDL
LIDMPLYGTKEVLIMYGSIRTCDKKNILNVLELLVKSNIYVNCISIAPEMHILKHICEKS
NGFYKICSSKNSLMNEINNNAETPLWMQGMEPQLIHICFPTKKKISTQIMCSCHGKLNTD
TYVCNFCNSYTCKIPSKCKVCGIHLISMHDLSHITNNLQGSPLFIEIKNEQGNYKVCSSC
NQQLYNKIYQCTKCQHIFCLECDIFIHEELNQCPFCLINDT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcctcaaaatagtgaaaataaagtcatttttgttgaagatgttgtaagagat
tttgacgaaaatgaaatatttgaagagataactgggaaatttacatgggaacaagatgtt
gaacgatcatggaatttgctggtagaaaataatggtgtgctacaacatgttagccaagag
aataacgaaaatgaaaataaggagaaatatagaaagaatcaaggatcttccttaaggaaa
ggaatattcagacacataatcatactatttgacatgtctagtagtatgaaagaaagggat
ttaaaaccagataggataaatgtagctttagaatgtgtggaatcatttttaaaaaacttt
ttcttcaaaaatcctgtcggacatgttggtgtagtagctttaaagaatagttcagcaaaa
ttaatacaaccatttacatcaaatgtagatgatatattaaattcgatattaaaggaaaga
actgcaggtcttcaaggttccccttcattagaagaaggattacagatagcacatgattta
ttaattgatatgccattatatggaacaaaagaggttttaataatgtatggatctataaga
acatgtgataagaaaaacattttaaatgtattagagttattagtaaaaagtaatatatat
gtaaattgcatttcaatagctccagaaatgcatatattaaagcatatttgtgaaaaatca
aatggtttttataaaatatgttcaagtaaaaattctttaatgaatgaaataaataataat
gcggaaacacctttatggatgcaaggtatggaacctcaattaattcatatatgttttcca
acaaagaaaaaaatcagtactcaaataatgtgttcatgtcatggtaaattaaatactgat
acatatgtttgtaatttttgtaatagttatacttgcaaaataccatccaaatgtaaagta
tgtggtatacatttaatatcgatgcacgatctttcacatattacaaataatcttcaaggt
tctcctttatttatagaaataaaaaatgaacaaggaaattataaagtatgttcatcatgt
aaccaacaattgtataacaaaatataccaatgtacaaaatgtcaacatatcttctgtctt
gaatgtgatattttcattcatgaagaattaaatcaatgtcccttttgtttaattaacgat
acataa
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