Phascolarctobacterium faecium: PFJ30894_01770
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Entry
PFJ30894_01770 CDS
T05784
Symbol
ykoD_2
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfac02000
]
PFJ30894_01770 (ykoD_2)
Transporters [BR:
pfac02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
PFJ30894_01770 (ykoD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
RsgA_GTPase
AAA_22
AAA_29
SMC_N
AAA_18
Rad17
MMR_HSR1
AAA_16
AAA_25
AAA_28
nSTAND1
DUF815
AAA
AAA_30
Viral_helicase1
Zeta_toxin
AAA_7
DUF5507
NB-ARC
AAA_19
Mg_chelatase
AAA_5
AAA_23
G-alpha
T2SSE
Motif
Other DBs
NCBI-ProteinID:
BBG64130
LinkDB
All DBs
Position
complement(1788059..1789711)
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AA seq
550 aa
AA seq
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MLRISDVSYRYKTRKIPTLKHLSLHVTEGEMLLLAGCSGCGKSTLIKAVSGLLNTAGAGE
LDGKIYLNNKDTAEMTPEDIGILVGTVYQSPDDQLFAMTVSDEVGFALENQGLDENIISV
EVQKVLERVGLAGFEQNSIHTLSGGQRQRLALASVLITKPKLLVLDEPVSQMNPQGVEDF
LQLLVSLNRIDGITIIVVEHRVNELAKYFPRLAVMFEGEVIYDGPIELAWQKIGSAEKYG
LREPQKVKLCRFLHLSKLIDETSKVVDLIKSECKIEKTALTVRSKKACSEAIVTGKAIRY
RYPGSTSDTLQGIDFELYKGETVALMGFNGAGKSTLINLLGGLAELSSGELDLLGGTVGE
RAYEIGYLRQEPDLMLLADSVWEELTWKNKKVRKEVVWELLEKLKLENNTNDFPLALSKG
QRLRVVLGALLARNPKLLLLDEPTTGQDQQSLEEIKKLIAYFSQMGGCVLFCTHDIELAS
EIADRVIIMANGKLIANGAPEVILSDRWILSAGGLTVPPLLEVSEALLLPKCITVEGVGR
YVSTAVMGRL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaataagtgacgtttcataccgatataaaacacgcaaaattcctacattaaaa
catttgtctctgcatgtaacagaaggcgaaatgctgcttttggccggttgcagcggttgc
ggcaagtctacgctcattaaagctgtcagcggtcttttaaatactgccggcgccggtgaa
cttgatgggaaaatttatctgaataataaagatacagcggagatgacgcctgaagatatt
ggaatattggttggtactgtttatcaatcgccggatgatcagctttttgcgatgactgtt
tctgacgaagtaggttttgcgcttgaaaatcaggggcttgatgagaatataatttcagtt
gaagtacaaaaagtattagagcgagttggacttgccggttttgaacaaaatagtattcat
actttatcaggaggacaaaggcagcgattggctctggcttcagtactcatcacgaaacct
aagcttttggttttagacgaaccggtaagtcagatgaatccacagggtgttgaggatttt
ttgcaattattagtatctttaaatcgtatagacggtataactatcattgtagttgaacat
cgtgtcaatgaacttgcaaaatattttccgcgtctggcagtgatgtttgaaggtgaagtt
atttatgatggtccaatagaactagcctggcaaaaaattggttctgcagagaaatatggt
ttgagagagccgcaaaaagttaaattgtgccggtttctgcatttgtctaaactgatagac
gaaacgagtaaagttgttgatttgatcaaaagcgaatgtaaaatagaaaaaacagcactg
accgtaagatcaaaaaaagcttgtagtgaagcaatcgtaactggcaaggccataaggtat
cgttatcctggttctacaagcgatacgttgcaaggtatagattttgagctttataaaggt
gaaactgtagcgctgatggggtttaacggtgcaggaaaaagcacattgatcaatttgttg
ggtggattagcagaactgtcgtcaggcgaactggatttgttgggtggaacggttggagaa
cgagcatatgaaataggctatttacgtcaggaacctgacttaatgttgttggctgacagt
gtttgggaagaattaacatggaaaaataaaaaagttaggaaagaggttgtatgggagctt
cttgaaaaactaaaactggaaaataatacgaatgattttccactcgcattaagtaaaggg
cagcgtttaagggtagttttgggagccttgctggcaagaaatcccaaactactgcttttg
gatgaaccaacaacgggtcaagatcaacaaagtcttgaagaaataaaaaaactcatagca
tatttttctcaaatgggcggctgcgttcttttttgtacgcatgatatagagttggcatca
gaaattgcagatagagtgattattatggcaaacggtaaacttattgcaaatggagcgccg
gaagttattctatctgatagatggatactgtcagctggcggtttaactgttccgccatta
ttagaagtttccgaggcgttgttattacccaaatgtattacagtagagggggttggacgt
tatgtcagtacggcagttatgggaaggttgtga
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