KEGG   Pseudomonas fakonensis: KSS94_05960
Entry
KSS94_05960       CDS       T07698                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pfak  Pseudomonas fakonensis
Brite
KEGG Orthology (KO) [BR:pfak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfak03400]
    KSS94_05960
Enzymes [BR:pfak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KSS94_05960
    5.6.2.6  RNA 3'-5' helicase
     KSS94_05960
DNA repair and recombination proteins [BR:pfak03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KSS94_05960
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QXH52675
LinkDB
Position
complement(1297714..1300158)
AA seq 814 aa
MPDLALAWFTSRGWKPFAFQRQAWAAIDRGESGLLHASTGAGKTYALWLGALRAFAGTAA
GRQPAPLQVLWITPMRALAADTAQALQVPLDELGLNWSVAVRSGDTGSAERARQARRLPS
ALITTPESLTLLLTRAQAEQDFASLRLVVVDEWHELLGNKRGVQLQLALARLRRWRPQLV
VWGLSATLGNLEHALQVLVPDGGLLLKGRQNKRLIVDTLIPAQLERFPWAGHMGLKMLAQ
VAAELDGSASSLVFTNTRAQAELWYQALLEARPEWAGLIALHHASLARETRNWVEGALKQ
GQLKAVVCTSSLDLGVDFLPVERVLQVGSAKGIARLMQRAGRSGHAPGRTSRITLVPTHS
LELVEAAAARQALAAGHIEARRSPRLCMDVLVQHLVSMALGAGMRPEQLLAEVRSTWAYR
DLQASQWQWALAFVHNGGSALGAYPDYQRVEAHADGIWRVTSERLARRHRMGIGTIVSEA
SLQLKFWSKGGGKALGSVEEAFIARLRPGDTLMFAGRMLELVRVENMTAYVRRSTSRKAA
VARWNGGRMPLSSELADALVEQLEAASHGHFESPELRAVRPLLTLQASWSALPTRTTLLA
ETLSSRQGSHLFLYPFAGRMANLGLASLIAWRVSRAQPLSVSIAVSDYGFELLTPSRVDW
ATHLPAALSAGQVLEDVLASLNASEMALRRFREIARISGLVFGGYPAAQKSTRQIQASSG
LFFEVFRKHDPGNLLLGQARDEVLGEELEIDRLHRHLQRMSSQQLDLHALKRPGPLAFTL
LVEGMRETLSTEKLADRIARMVAELENAAGNGHG
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgcccgacctcgccctcgcatggttcaccagccgcggctggaagccgttcgccttccag
cgccaggcgtgggccgccatcgaccgtggcgaaagcggcctgctgcacgccagcaccggt
gccggcaaaacctacgcgctctggctgggcgcgctgcgtgccttcgctggcaccgccgcc
ggccgccaacccgccccgttgcaggtgctgtggatcacccccatgcgcgccctggccgcc
gacaccgcgcaggccttgcaggtgccactggatgagcttgggttgaactggagcgtggcc
gtgcgcagcggcgacaccggcagcgccgagcgcgcccgccaggcgcggcgtctgcccagc
gcactgatcactacccccgagagcctgaccctgctgctgacccgtgcccaggccgaacag
gacttcgccagcctgcgcctggtggtggtggatgaatggcatgagctgctgggcaacaag
cgcggggtgcaactgcaactggccctggcacggctgcgccgttggcggccgcagttggtg
gtatgggggctgtcggcgaccctgggcaacctcgagcacgccttacaggtgctggtgccg
gatggcggcctgctgctcaaggggcgccagaacaagcgcctgatcgtcgacaccctgatc
ccggcacagcttgagcgcttcccctgggccgggcacatgggcctgaagatgctcgcccag
gtggccgccgaactggacggcagtgccagcagcctggtgttcaccaacacccgcgcccag
gccgagctgtggtaccaggcactgctggaggcgcgcccagagtgggccgggctgatcgcc
ctgcaccacgcctcgctggcccgggaaacccgcaactgggtcgagggggcgctcaagcag
ggccaactcaaggccgtggtgtgcacctcgagcctggacctgggggtagactttttgccg
gtggagcgggtgttgcaggtcggctcagccaagggcatcgcccggctgatgcagcgcgcc
gggcgctccgggcatgcgccggggcgcacctcgcgcatcaccctggtgcccacccacagc
ctggagctggtggaggcggcggcggcccgccaggcactggccgccgggcacatcgaggcc
cggcgctcaccacggctgtgcatggatgtgctggtgcagcacctggtgagcatggctctg
ggcgccggcatgcgccccgagcaactgctggccgaagtgcgcagcacctgggcctaccgc
gacctgcaggccagccagtggcagtgggcgctggcgttcgtgcacaacggcggcagcgcc
ttgggtgcctaccctgactatcagcgcgtggaggcccacgccgacggcatctggcgggtg
accagtgaacgcctggcgcggcgccatcgcatgggcatcgggaccatcgtcagcgaggcc
agcctgcaactgaaattctggagcaagggcggcggcaaggcgctgggtagcgttgaggag
gctttcatcgcccgcctgcgccccggcgacacgctgatgttcgccgggcggatgctggag
ttggtgcgggtcgagaacatgaccgcctatgtgcgccgcagcacctctcgcaaggcagcc
gtggcacgctggaatggcgggcgcatgccgttgtccagcgaactggccgacgccctggtc
gagcaattggaggccgcctcccacggccacttcgaaagccccgaactgcgtgcggtgcgc
ccgctgctgacattgcaggcaagctggtcggcactgcccacccgcaccaccctgctggcc
gaaaccctgagcagccgccagggctcgcacctgttcctctacccctttgccgggcgcatg
gccaacctggggctggccagcctgatcgcctggcgggtcagccgtgctcagccgctgtcg
gtgtcgatcgcggtgagtgactacggcttcgaactgctcacccccagccgggtggactgg
gccacccacttgccagcggcgttgagcgccgggcaggtactcgaagacgtgctggccagc
ctcaatgccagcgaaatggccctgcgccgctttcgcgaaatcgcccggatttccgggttg
gtattcggcggctacccggcggcgcaaaaaagcacccgacagatccaggcctccagcggg
ctgttcttcgaggtgtttcgcaagcatgacccgggcaacctgctactgggccaggcccgc
gacgaagtactgggcgaggagctggaaatcgaccggttgcacaggcatttgcaacgcatg
agcagccaacagctggacctgcatgccctcaaacgccccggcccgctggccttcaccctg
ctggtggaaggcatgcgcgaaaccctgagcaccgagaaactggccgaccgcatcgcccgg
atggtggcagagctggaaaacgccgcaggtaacgggcatggatga

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