Pseudomonas synxantha LBUM223: VO64_3202
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Entry
VO64_3202 CDS
T03769
Name
(GenBank) Biofilm PGA outer membrane secretin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
pfb
Pseudomonas synxantha LBUM223
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_1
TPR_9
TPR_11
TPR_2
TPR_7
TPR_10
TPR_12
TPR_8
DUF6584
TPR_20
TPR_15
Motif
Other DBs
NCBI-ProteinID:
AKA83748
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Position
3602328..3604808
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AA seq
826 aa
AA seq
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MLRIHPLSASGQLRLLIGAALCGPLLMPAYAVADPAYDALIIQARNGHFTPALTQLRQLS
AERQSPGQVSDHLVIAGWAGQDAEVLKVYEAQGKYRNLTTQALATVARTYRNQKQWAQAE
AVYRQALLREPNNVDLQLGQALTQADGGKANEAVQRLRTMVAAQPNDPNRRMALGYALTR
AGLNYDALFEFDQAFIRAGDKPEVAREYIVALQKARMPEPALRLSAKRPGLVDAVTQRRL
EGDLAAERVRMAEFATRTEKERYVIADRALQDYDKLISRWGPDTTAHDDVVGWRIDRLGA
LKARARTAEVIREYETLTAEGVQLPTYAVRWVAASYLDQRLPEKAAPLYRQALTAADADV
GDHVKDSTALFYALLENDQVDEARAVATQLASTEKPRVELKGLPIGNPNDEWMDAQQLAA
QAGTYGADLDASEQSLEDLGSKAPGSIGVRLAQAEMYRAREWPRRAEDSLKETENQSPRD
IGVEMSQGFTALDLQEWRQLDLLTDDVVARAPDNRQVQRLKRLRDVHDMAEVRVEAYTGK
SFGGGNNQEAGAVSGSRDWGIESVIYTPPIDEDWRVFAGVGYGTADFAEGTGHHRWQRVG
VERRTRDMTIEAEVSNHSYGDGSKQGASVSIARDINDHWQYGGSLGYLLNTTPLRALNDG
VTANGGSGFIRWRANESREWKLTVSPSHFSDGNDRVEALLTGREGIYSSPKVQVELGLDV
GASRNSKEDTIYFNPKSDFSVLPTVNVNHVLYHRYETQWSQQFQIGAGTYSQKDYSTGGV
GLIGYGQRFRWNDVLEAGANLSLVSRPYDGERERDLRLLLDLTYRF
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgaatccatccactcagtgcatcaggccagttgcgactgctcattggagcagcc
ttgtgcggcccattgctgatgccggcctatgccgtggctgaccctgcctacgacgccctg
atcatccaggcccgcaacggtcacttcacgcccgccttgacccagttgcgccaactgtcc
gccgaacgccagagcccaggccaggtcagcgaccacctggtgatcgccggctgggccggg
caagacgccgaagtgctgaaggtgtacgaggcacaaggcaagtatcgcaacctcaccacc
caggcgctcgccacagtggcgcgcacctatcgtaatcaaaagcagtgggcccaggccgag
gcggtctatcgccaggcgttgctgcgtgaaccgaataacgtcgacctgcaactgggccaa
gccctgacccaggccgatggcggcaaagccaatgaggcggtgcaacgcctgcgcacgatg
gtggcggcgcaacccaacgaccccaaccgccgcatggccctgggttatgcgctgacgcgt
gccggcttgaactacgacgcgctgttcgagttcgaccaagcctttatccgcgccggcgac
aagccggaagtggcccgtgaatacatcgtcgccctgcaaaaggcgcgtatgccggagccc
gccctgcgcctgtcggccaagcgccccggcctggtggatgcggttacccagcgccgcctg
gaaggcgacctcgccgccgagcgcgtgcgcatggccgagttcgccacgcgtactgagaag
gagcgctatgtcatcgctgatcgcgccctgcaggattacgataaattgatcagccgctgg
ggcccggacaccactgcccacgacgacgtggtgggctggcgcattgaccgcctgggcgca
cttaaggcgcgggcgcgcacggctgaggtgatccgcgagtacgaaaccctcacggccgag
ggcgtgcagttgccgacctatgccgtgcgctgggtggctgcgtcctacctcgatcagcgt
ctgccggaaaaagccgcgccgctgtaccgccaagcgctgaccgcagcagacgccgacgtt
ggtgatcacgtcaaagacagcacggccctgttctacgccctgttggaaaacgaccaggtg
gatgaggcgcgtgcggtcgccacgcagttggccagcaccgagaagcctcgggtcgaactc
aagggcctgcccattggcaaccccaacgacgagtggatggacgcccagcaattggcggcc
caggccggcacctatggggctgacctggatgccagcgaacagagcctggaagacctgggc
agcaaagcccccggcagcatcggtgtgcgcctggcacaggcggaaatgtaccgggcccgt
gaatggccaaggcgcgctgaggactccctcaaggagactgaaaaccagagcccccgtgac
atcggtgtagaaatgtcccaaggcttcaccgcgctggacctgcaggaatggcggcaactg
gatctgctcaccgatgacgttgtcgcccgtgccccggacaaccgccaggtacagcgcctc
aagcgcctgcgcgatgtgcacgacatggccgaagtgcgggtggaagcctacaccggtaaa
agcttcggtggcggcaataaccaagaagccggcgcggtgtcgggtagccgcgactggggc
atagaaagtgtgatctacaccccgcccatcgacgaagactggcgcgtgtttgccggcgtc
ggctatggcactgccgattttgccgaaggcaccggccatcaccgctggcagcgtgtgggt
gtggagcggcgcacccgcgacatgaccatcgaagccgaggtgtccaaccattcctatggc
gatggctcaaagcaaggcgcgagcgtgtcgatcgcccgcgacatcaacgaccactggcag
tacggcggcagccttggctatctgcttaacaccacgccattacgggcgttgaatgatggg
gtcacggccaacggcggcagcggttttatccgctggcgcgcgaatgaaagccgcgagtgg
aaactgactgtcagcccgtcccatttcagtgatggcaacgaccgcgtcgaggccttgctc
acgggccgcgaaggcatctatagctcgccgaaagtacaagtggagctgggcctggacgtc
ggtgccagccgcaacagcaaggaagacaccatctacttcaaccccaagtccgacttcagc
gtgttgcccaccgttaacgtcaaccatgtgctttatcaccgctacgaaacccagtggagt
cagcagttccagatcggcgcaggcacctatagccagaaggattactccaccggtggcgtt
ggcttgatcggctacggccaacgctttcgctggaatgacgtgctggaagccggcgccaac
ctgagcctggtcagccgaccttatgacggcgagcgcgaacgtgatctgcgcctgctcctc
gacctcacttaccgtttctag
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