Pseudomonas synxantha LBUM223: VO64_4997
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Entry
VO64_4997 CDS
T03769
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pfb
Pseudomonas synxantha LBUM223
Brite
KEGG Orthology (KO) [BR:
pfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfb03021
]
VO64_4997
Transcription machinery [BR:
pfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VO64_4997
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
SelB-wing_1
Speriolin_N
Motif
Other DBs
NCBI-ProteinID:
AKA85543
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Position
5579746..5580360
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AA seq
204 aa
AA seq
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MAAADDAHLLERLLKGEQRAYKELVSTYQSAMRAVAYAIVGQRHADEVVQDAWLSVVRNL
ARFEGRSSLKTWLLTITANSAKGRYKQNRREVLLDDLPSPHGTIGDERFSPDDGHWAVAP
YAWHQDTPEALLTEDELRECLEHTILSLSQLQGSVLVLRERQGLELEEICNLLSLSLSNV
RVLLHRARLKVFATVEHFEETGEC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcggacgacgcgcacctgcttgaacgcttgctcaagggagagcagcgggcc
tacaaggaattggtcagcacttaccagagcgcaatgcgcgcggtggcctatgccattgtc
ggccagcgccacgccgacgaggtggtgcaagacgcctggctctcggtggtgcgcaacctg
gccaggttcgaaggacgctccagtctcaagacctggctgctgaccatcaccgccaactcc
gccaaagggcgttataaacagaatcgccgggaagtgctgctcgacgatttgccttcgccc
catggcaccattggtgatgagcgattcagcccggatgacggccactgggcagtcgcgccg
tatgcctggcaccaggacaccccggaagcgctgctgaccgaggatgaattgcgcgaatgc
ctggagcacacgattctgagcttgtcccaattgcagggcagtgtgctggtgctacgtgaa
cgccagggattggagttggaagaaatctgtaatcttctgagcctttcactttccaatgta
cgtgtgctgttgcatcgagcgcggcttaaagtcttcgccacggtggagcattttgaggaa
acgggagaatgttga
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