Pseudomonas synxantha LBUM223: VO64_5792
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Entry
VO64_5792 CDS
T03769
Name
(GenBank) hypothetical protein
Organism
pfb
Pseudomonas synxantha LBUM223
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
Aspzincin_M35
Motif
Other DBs
NCBI-ProteinID:
AKA86338
LinkDB
All DBs
Position
complement(6520659..6525797)
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AA seq
1712 aa
AA seq
DB search
MTRVTPPYFFDEFLQPVNRSTLSERERALGLTVKDLEWLHGVYYASAASRQDSRLQSPAM
RVEKLLLTVAGKAVIPLAGVFLMSPSPDGSKALLYTPYGGIQVFDSHATLLAEVSQALAD
PVQRVELLSFLSIAQRNSLPVGTAMTLTTLLVEGAVMADQEQTLQACQQANVHAILAQLQ
KTPTLSGMLDTLLGIMAHPYFPGLDQRDTRVNCFMQSPTDADRRWIDPLPLREALLLFYV
KHAWPTGQTREFFNPKHVTTDFTPTQLQQDREHWERLVEQTSGTLSKLLDSLLQTYWNED
IDGGTSRLQLFAQVMADKFRLDILLKRQAGILSSTDSHMLQAMFLDDQAARSAYAANLSV
EKVRIYAPYQHYVELASTLMLHENHAYLYTQSRGLQVLQDLDDLKDTLLSMLKAAGHEDE
LLNFLSLDERNIFIGLDQINIAARPVTGHVFTSMIEDIAAKQISNMNHALGLYRASAGQV
DLDALLDYALDIRTMLDHRLVDLETNGRWTVHPVTSGNGRPSTVLAERAKLHLRRLQAAQ
EGLSIELAKHPTLRGMAAVALDMQLQKHLLDLKADEVNINTYASRAQQREERPALSSLSM
VEHFIQRLAQESRPLPVSSRTGFYTKRDQGVAQQLNNISLKSFNAIIEQVLNVFAGHDMR
ELPRLFLENTRDKHAHSMLLGLRSEAELRLLGKTLPTAPHAILDTVLRTDSLVRLTRHGI
NGFLPDAYALTLQQGTYDTLLPLANLFVITERGGLDPRRSGQATLWTPRRGHEVFASVPA
LLQALTKRLEHPIKRLSLLENLPFSQRVPHRQYRLGPLQRIDENLLDDRLKTYGNCVMDA
VDHLLAMDLPARAVQDRLDAVLQTPAPTNLGRAQALAEAMVNQQALPVWLAMAPAAEQIH
HAELLEQYHNSAPEEEDYLHGITTIREHTFSALLELLQARFPKQTISPDNVLIPVHQALD
IHDYNLTDFALRHWPDLNSQIIRPRSRSAEPLPPTLDANAVIQMVRQLDLKSIYQKHLQT
ALDTSTEAARARRRRFCRQLPWQVLQYAHEQHLQERLSSEAMGLVQQVFDMPDGLARAAL
EGASALIRPVELVATAGATAAKVLGMYLIGAPSKEAGPVVLYAPYSEHHVLKQYASEQAL
LDELERPGELQDWALQHLEDPHQAIYRGLWQDNRHRPSEVHLASAPVMGNLLHYLFSENT
LILLKMLACQFKKGTKLLWDKVVDLLGKGIPTAVYFMAGKLAYPLVVWRSYKLVKRSMEA
LQLHQWKAAMKDFILAVVQMASLYSELDGSETPPPDEAEVVDLPEGTLPTATTLATLDLT
ATSRTRLQQFEEHDIDLQDLELNTASHVYKDKTSAKDYVPLGGKVYPLKKTKDHWRLGGD
DQQGPYVGRNAEGRWVVDLAIHKPRFGQAWTRHKVLRAERHDINIEARGIRAIAAVSSWK
AQAIDEALNVATYYAVNCKRNIQHFANLLTPDSRVGLFLCDLFGTLNLSPDQVRKIEHIV
DGILDELSDPTLISADSMRFVSGASLVDPTSEYAMVLVTDSERKVYLFERFFDPNMSDYL
DRLSVPFDMSAHARAATLIHELTHLRFETADIAYLRSLEPFRDLIDTAKPGAQAVKTRQD
DLQTTALSTLTPASVLFKTWDDVSNTWEDYGFFTTTHYLKRKVLSTTGAKNLIEARQIFM
SNVDKRIDVILSNADSVTYLITHLGRMLDVGA
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgtcaccccaccgtattttttcgacgaatttttgcaacccgtcaatcgttcg
acactgagcgagcgcgagcgcgccctggggcttacggtcaaggacctggaatggctgcat
ggcgtgtattacgccagcgctgccagccgtcaggatagtcgcctccaaagccccgccatg
cgtgtcgaaaagctgttgctcacggtagcgggcaaagccgtgatcccactggccggtgtg
ttcctgatgagccccagcccggacggtagcaaggccctgctgtataccccctacggcggt
atccaagtctttgacagtcatgccacgctgctcgccgaggtcagccaggcactggccgac
ccggttcagcgcgtcgaattgctcagtttcctgtcgatcgcccagcgcaacagcctgccg
gtgggcacggccatgacgctgacaaccctactggtcgaaggtgccgtcatggcggaccag
gaacaaaccctgcaggcctgccagcaggccaacgtacacgccatcctggctcagttgcag
aaaaccccgaccctgtccggtatgctcgacaccctgctcggcatcatggcccatccgtat
ttccccggcttggatcaacgggatacgcgggtcaattgctttatgcaaagcccgacggat
gccgaccggcgctggatcgacccgctgccgctacgggaagcgctcctgctgttctacgtg
aaacacgcctggcctacagggcaaacccgcgagttcttcaaccccaagcatgtcaccacc
gacttcaccccgacccagttgcaacaagaccgggaacactgggagcgcctcgtcgaacaa
acctccggtacgctgtccaaactgctcgatagcctgctgcaaacctactggaacgaggac
atcgacggtggcacctcgcgcctgcaactgtttgcgcaagtcatggccgacaaatttcgc
ctcgatatactgctcaagcgccaggccggcatccttagctccaccgatagccatatgctc
caggccatgttcctagacgaccaggccgctcgcagcgcctacgccgccaacctgagcgtg
gaaaaagtgcgtatctatgcgccctaccagcactacgtggaattggccagcaccctgatg
ctgcacgaaaaccacgcctatctgtacacccaatcccgtggcctgcaggtactccaagac
ctggatgacctcaaggacacactgttgagcatgctcaaggccgccggacacgaagatgag
ctgcttaatttcctgtccctggacgaacgcaacatcttcatcggcctggaccagataaac
attgctgcgcgccccgtcacggggcatgtgtttaccagcatgatcgaagacattgccgcc
aagcagatcagtaacatgaaccacgccctgggcctctatcgcgcaagcgccggccaggtg
gatctggacgccttgctcgattacgcgttggacatccgcaccatgctcgaccatcggttg
gtcgacctggaaaccaacgggcgctggacggtccatcctgtgaccagcggtaatggccgc
ccctccacggtcctggccgagcgcgccaaattgcatctgcgccgcctgcaagctgcccaa
gaggggttaagcattgagctcgctaagcacccgacactgcgcggcatggcagccgtggcg
ctggacatgcaactgcaaaagcacctgctggacctcaaggccgatgaggtcaacatcaac
acctacgcctcccgcgcccagcagcgcgaggagcgtccggcgctttcgtccctgagcatg
gttgaacacttcatccagcgcctggcccaggaaagcagaccgctgccggtgtcatccagg
acgggtttctacacaaagcgcgaccagggtgtggcccaacagctcaataacataagcctc
aaaagctttaacgccatcatcgaacaggtgctgaacgtgtttgccggccatgatatgcgt
gaactcccgcgtctgttcctggaaaacacccgcgataaacatgcgcactcgatgctgctg
ggcctgcgcagcgaggctgaactacggctgctggggaaaaccctgccgaccgctccccat
gccattctggatacggtgttgcgcaccgacagcctggtgcgtctgacccgccatgggatc
aacggtttcctcccggatgcctacgcactgaccttgcaacagggcacgtacgatacgctg
ctgccgttggccaacctgtttgtaatcaccgagcgtggcggccttgaccccaggcgctcg
ggccaggcgactctatggacgccccggcgcggccatgaggtatttgcctcggtcccggcc
ctgctccaggccctcaccaagcgcctggagcatccgatcaaacgcctctcgctgctggag
aacctgccgttttcccaacgcgtgcctcatcggcagtatcgcctggggccactgcaacgt
attgacgagaacttgctggatgatcgtctgaaaacttacggcaactgcgtcatggacgcg
gtggatcatctgttggcaatggacctgcccgcgcgcgccgtgcaggaccgcctggatgcg
gtcctgcagacgcctgccccaaccaacctggggcgggcccaggcgttggccgaggccatg
gtcaaccagcaggccctgcccgtctggctggcaatggcgccagccgcggagcagatccac
cacgccgaactgctggagcaatatcacaacagcgcccccgaggaagaagactacctgcat
ggcattacgaccatccgcgagcataccttttccgcccttctggagctgctccaggcacgc
tttcccaagcagaccatcagccctgataacgtgctgattcccgtacaccaggccctggat
atccacgactacaatctgaccgattttgccttgcgccactggccggacctgaacagccag
attattcgcccgcgctcacgtagcgccgagcccttgccccctaccctggatgccaatgcg
gtgatccagatggtgcggcagttggacttgaaatcgatctaccagaagcacctgcaaact
gcgctggacaccagcaccgaggcagcccgtgcacgccggcgtcggttctgccggcaattg
ccttggcaggtgttgcaatatgcccacgagcaacatcttcaagaacgcctctcgagcgag
gccatgggcctggtccagcaagtgttcgacatgcccgacggcctggcacgcgcggcgctg
gagggcgcgtctgcgctgatccggcccgtggaattggtggcgaccgcaggcgccactgcc
gccaaggtactgggcatgtacctgatcggtgcgcccagcaaagaggccggccctgtggtg
ctgtatgccccctacagcgagcaccatgtgctcaagcaatacgccagcgaacaagcgttg
ctggatgaactggagcgcccgggcgagctgcaggactgggccctccagcacctggaggat
ccgcaccaggccatttaccgtggcttgtggcaggacaatcgtcatcgcccatcggaagtc
caccttgcctcggctccggtcatgggtaacctgctgcattacctgttcagtgaaaacacg
ctgatcctgctcaagatgctcgcctgccagttcaaaaaaggcaccaagctgctctgggac
aaggtcgtcgacctactcggcaaggggattcccacggcggtgtacttcatggcgggcaaa
ctcgcctatccgctggtggtctggcgcagctacaagctggtcaagcgctcgatggaagcg
ttgcaactgcaccagtggaaagccgcaatgaaggacttcatcctggccgtggtgcaaatg
gcctcgctgtacagtgaactcgacggcagcgaaaccccgccgcccgatgaggcagaggtc
gtcgacctgccggagggcacactgcccacggccaccaccctggccaccttggacctcacc
gccacctcacgtacgcggttgcaacagttcgaggaacacgacatcgacctgcaggacctt
gagctgaacaccgcctcccatgtctacaaggacaagaccagcgccaaagactatgtgcca
ctgggcggcaaggtgtatccgctgaagaaaaccaaggaccactggcgcctgggcggcgac
gatcagcaaggcccttacgtcggccgcaacgccgaggggagatgggtggtggacctggcc
atacacaagccgcgcttcggtcaagcctggacgcgccacaaagtgctgcgggccgaacgg
cacgatatcaatattgaagcgcggggtatcagggcgattgccgcagtgtccagctggaaa
gcccaggccatcgacgaagcgctgaatgtggcgacctactatgccgttaactgcaagcgc
aacatccagcactttgcaaacctgctcacgccagacagccgggtcggcctgttcttgtgc
gacctgttcggcaccctcaacctgagcccagaccaggtcaggaaaatcgagcacatcgtc
gacggaatattggacgagttgagtgaccccacgttgatcagcgctgactcgatgcgtttc
gtcagcggcgccagcctggtggatcctaccagtgaatacgccatggtgctggtcactgac
agcgaacgcaaagtgtatttattcgagcgattctttgatccgaacatgtcggattacctg
gacaggttgagcgttcccttcgacatgtcggcccacgccagggccgctaccctgatccat
gaactgacccacctgaggttcgagacagcagatattgcctacctgcgcagcttagagccg
tttcgcgacctgatcgacaccgccaagcctggcgcccaggcggtgaagacccgccaggat
gatttgcaaaccactgccttgtccacattgacgccggccagcgtattgttcaagacgtgg
gatgatgtttcgaatacctgggaggactacggttttttcactaccacccactacctcaag
cgcaaagtcctgagcaccaccggtgccaagaacctgattgaagccaggcaaatctttatg
agcaacgttgacaagcgcattgacgtgattctatccaacgcagactcagtcacttacctg
ataacgcatctggggcgtatgcttgatgtgggggcctga
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integrated database retrieval system
