Pseudomonas fluorescens A506: PflA506_3253
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Entry
PflA506_3253 CDS
T02114
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pfc
Pseudomonas fluorescens A506
Pathway
pfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PflA506_3253 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfc03400
]
PflA506_3253 (xth)
Enzymes [BR:
pfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PflA506_3253 (xth)
DNA repair and recombination proteins [BR:
pfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PflA506_3253 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AFJ55859
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All DBs
Position
3644502..3645314
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK
GHYGVALLSRKEALSVHKGFASDEEDAQRRFIWGTFADENGHPVTIMNGYFPQGESRDHP
TKFPAKQRFYADLQHLLETQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF
LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDVILASTGL
VPRVKDAGVDYDLRGLEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctccttcaatatcaacgggctgcgtgctcgccctcatcagttggcggcg
ctgattgaaaagcatcaaccggacgtgatcggtttgcaggaaaccaaggtccacgatgat
cagttcccgttggccgaagtgcaggccctgggttatcacgtgtactaccacgggcagaaa
ggccactacggcgtggccctgctctcgcgcaaagaagcgttgagcgtgcacaaaggcttt
gccagcgatgaagaagacgcccagcgtcggtttatctggggcaccttcgccgatgaaaac
ggccacccagtgaccatcatgaacggctacttcccccagggcgaaagccgcgaccaccca
accaagttcccggccaaacagcgcttctatgcagacttgcagcacttgctggaaacccag
ttcagcaatgaccaggcactggtggtgatgggcgacgtgaacatttccccagaggactgc
gacatcggcattggcgccgacaacgccaagcgctggctgaaaaccggcaagtgcagcttc
ctgccggaagaacgcgagtggatggcacgcttgaagaactggggcctggtcgacagcttc
cgccacctcaacccggacgtgaccgaccgtttcagttggttcgattaccgcagccgtggc
tttgaggacgagcccaagcgcgggctgcgcatcgacgtgatcttggcgtccaccgggttg
gtgccacgggtcaaggacgccggggtggattatgatttgcgtgggctggagaaaccgtcg
gaccatgcgccgatctggttggaactgagctga
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