Pseudomonas fluorescens A506: PflA506_3815
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Entry
PflA506_3815 CDS
T02114
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pfc
Pseudomonas fluorescens A506
Brite
KEGG Orthology (KO) [BR:
pfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfc03009
]
PflA506_3815 (rumA)
Enzymes [BR:
pfc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PflA506_3815 (rumA)
Ribosome biogenesis [BR:
pfc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PflA506_3815 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
TRAM
Cons_hypoth95
MTS
Methyltransf_23
Methyltransf_11
PCMT
Methyltr_RsmB-F
Met_10
RrnaAD
DREV
Methyltransf_15
PDGF
Motif
Other DBs
NCBI-ProteinID:
AFJ55366
LinkDB
All DBs
Position
complement(4229280..4230632)
Genome browser
AA seq
450 aa
AA seq
DB search
MAKHERGLRFQPTGGSRAPQIPVGKKQRLTIERLANDGRGIVFFEGRTWFVNGALAGEEV
EARVLGAHGKVVEARTERVFQASELRRPAPCAHVGRCGGCSVQHLPHDQQLALKQRMLAE
QLSRVAGVEPQEWAAPLSGPEFGYRRRARVAVRWDAKAKQLEVGFRAVASQDIVAIDDCP
VLVQALQPIMQRLPAMLRRLSKPQALGHVELFSGSSIAVLLRHMAPLSEADLQILKEFCT
FHDAQLWLHGEGQPESVEPGQALGFRLEAWDLELAYRPGDFVQVNAGVNQAMVAQALQWL
APQADERVLDLFCGLGNFALPLARHVREVVAVEGVQAMVDRAALNAVSNHLHNAQFFQAD
LSQPLTDAEWAKQGFSAVLLDPPRDGALEVVRKLAALGAKRLVYVSCNPATLARDTVELV
KQGYRLKRAGILDMFPQTAHVEAMALFEAG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcacgagagaggcctgcgctttcagccgacgggcggcagccgggccccacag
atacccgtgggcaagaaacagcgcctgaccatcgagcgcctggccaatgatggccggggc
atcgtgttctttgaaggccgcacctggtttgtgaacggtgcgttggccggagaagaggtg
gaagcacgggtgttgggcgcccatggcaaagtggtcgaggcgcgcaccgagcgggtgttc
caggccagcgagttgcgtcgcccggcaccctgcgcccatgttggccgctgcggcggttgc
agcgtgcagcacctccctcatgaccagcaacttgccctgaaacagcgcatgctcgccgag
caactgtcgcgggtggcaggtgtcgaaccgcaagagtgggccgcgccgttgagcgggccg
gagttcggttatcggcgccgcgcccgcgtagccgtgcgttgggacgccaaggcgaagcaa
ctcgaagtgggttttcgcgccgtggccagccaggacatcgtcgctatcgatgattgcccg
gtgctggtacaggccttgcaaccgatcatgcagcgtttgccagcgatgctgcgtcgcttg
agcaaaccgcaggcgttggggcatgtcgagttgttcagcggttcgtccatcgccgtgttg
ctgcggcatatggcgccgttgtccgaggctgacctgcagatcctcaaggaattctgcacc
ttccatgacgcccaattgtggctgcacggggaagggcagccggagtccgtcgagccgggt
caggccctgggcttccgtttggaggcgtgggatctggagctggcgtaccgtccgggcgac
tttgtgcaggtcaacgccggggtcaaccaggcgatggtcgcccaagccctgcaatggctg
gcgccacaagccgacgaacgggtactggacctgttttgcggcctgggcaatttcgccctg
ccactggctcgccacgtacgcgaagtggtggcggtggagggcgtacaggccatggtggac
cgtgcggccctcaatgccgtcagcaaccatttgcataacgcacagttttttcaggccgat
ttgtcccagcctttgaccgacgcagaatgggccaaacagggcttttctgcggtactcttg
gacccaccccgcgatggtgccctggaggttgtgcgcaaactcgccgccttgggggccaag
cgcctggtgtatgtgtcctgcaacccagccacgctggcgcgggacacggttgagttggtc
aagcaaggctaccggctaaagcgtgccgggatcctcgacatgtttccgcagaccgcgcat
gtcgaggccatggcgttatttgaagcgggctag
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