Pseudomonas fluorescens A506: PflA506_4072
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Entry
PflA506_4072 CDS
T02114
Name
(GenBank) leucine-rich repeat domain protein
Organism
pfc
Pseudomonas fluorescens A506
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6543
LRR_8
LRR_4
LRR_9
Motif
Other DBs
NCBI-ProteinID:
AFJ59715
LinkDB
All DBs
Position
4499132..4504180
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AA seq
1682 aa
AA seq
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MPTPYPTTISQRLAVAATQVPPGFHTRLPAWLASASDDKRQALKNAPLDIANWQADASRQ
QHAPLKQAVEQSWAAQNKVDTALADLKTPQAFAAPLLQQAFKTRWGVEIDVRTTHLRLYA
PLTIPLFPIETGGVNVWTVSLVDAALHNFDAAESEKTAFTADSSFITQPTATGQFDTLPS
VNSKVSIQTFVGLCRELDIGAQYQNYLKTFFGFKDAKRKASLRSTVIESLKAEAQTAVHL
ARLKKDGSERVLRTLQAQLKGISGLTLDGKTLLSHDLSLMDAPLAGIVLFAADLELHHSA
VPVVAYIPGDPQAPLKYYHDGIAFIQDLIRKLRDADYQAFFSRFISHEHRAYFFANLHNR
LSQVTWHHPVPGDPRPTWRAEPVANPNLQLHATKITGELYEHLYETKLNKLLNDARSIAV
STADADSKARWQRWAIVQKIGKALLEIAAFIATPFIPPLGLLMLGYTAYQLLDDVFEGIV
DWAEGLKRQAFGHLMSTLEQMVQLGMFAVGAPIAEGLLRQALPREVWAFFERLHPVSSDD
GKTRLWNPDLSPYAHDLQLPTASRPKADGLHAYGDKQILPLEGQHFAVKQQAGNAVLAHP
SHAHAYQPPVIGNGKGAWITPLDHPLTWHRSTLLRRLGEPANALSETGLEQAQRISSTDD
GALRKLYMDRQPPPPLLADSLKRIHIDQQLQDFIDQMNSDDPLVYAKADTQTQLWLLSQT
GLWPESKTLRFLNAKGETVWEHPGRENAAVAQIHEAQMNNGDLLKTLLETLDESERKTVL
EEDFGSPAPQLHVRAAKLRKQLARRAEDKRASMFDARYRGLELTTDARVQKLIDSTPGLP
VSAAEEVLLSAHGQDLLDIDQGTLPSHLVERARWAAHQVRISRAYEGLYMGALETGDTHR
LALHSLEKLPGWSPQVRLEVRDFKRDGHLRDAIGPAQAPIRRLLLRTIEGDYIPEDSKGT
LLGETDFYTAVLQALPDAQRDALAMQIGQGPHLRETLRQHTLAHDELGALLAEVPLLKPS
YDPTLVRLPGGMEGYDASPVTAGSSEGVSLESQLHALYPQLSPSQVTAVLAAMQNDPGTP
WGTLQFLKKEFSQLETNLRTWQQNVPQTLVGTDLPLSRWRIAAEQQNRFLWSQKLIGAWR
HNTPVDPAYDNGHLLQLNQPIYGELPALDTRLGHITTLEFQGYLTTRGTPGFLASFPGLR
RLAISDMTLRTLPGEISALTHLNALTLRGCALNLTTPTRAALANLTELHTLDLSHNPLVL
APNFENMANLRTLNLSHCGISIFPTGLLNRPRLANANLSHNNLRRLPEALYSLPASAAKA
YDLSGNPLTRATLERIKTYCQSTGEHFGVQANPDEVRLVQALYPTYNVPEANQFIFRLPG
GLDDSMANLVRLKADYERLQADLQEWVVDVPESHPVTNLPMDEQIRPQQQLIRAEIRALL
EQGWRRETSLDLSHDPLTQSHQMTLTLPLWGDLPRLNVDFKHISKLELRAQETTSIPEGF
LERFPNLESLLIHRYALQDIPAGVFKLPKLTTLSLTQCNLRLTPDSVAALSDLHDLEYLD
LSDNPLALTPDVSKMSGLETLMMENTRLTEVPHGVFNLTSLTQLNLSDNHITELPTDLLE
VDPDSAAGFDLSDNPFSPAALAILRRYYNRTAVDFDVAQARQPAPDRSSSRSATSSETEG
EE
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacgccctaccccacgaccatcagccagcgcctcgcagtcgccgccacccaagta
ccccccgggtttcacacacgcctgccggcctggctggcaagcgcctcggatgacaagcgc
caagccttgaagaatgcgccactggacattgccaactggcaggcagacgccagccgccag
cagcacgcgccgctcaaacaggcggtggagcagagctgggccgcgcaaaacaaagtagac
acggcgctggccgacctcaagacaccgcaggccttcgccgcgccgcttttgcaacaggcg
ttcaagacaagatggggcgtggagattgatgtccgcaccacccatctgcgcctgtatgcg
cccctgacgatcccactgtttcctatagaaactggcggcgtcaacgtctggaccgtgtcg
ttggtggacgccgcgctgcataacttcgacgcagcagaaagcgagaaaactgccttcacc
gcggactccagcttcattacccaacccaccgccaccgggcaattcgacaccctgccctca
gtgaacagcaaagtcagcatccagaccttcgtcgggctgtgccgtgaactggacatcggt
gcgcaataccagaactacctcaagacatttttcggcttcaaagatgccaaacgcaaggct
tcgctgcgcagcactgtcatcgagagcctcaaagccgaggcccaaactgccgtacacctg
gcgcgcctgaaaaaggacggcagcgagcgggtgttacgcacgctccaggctcaactcaaa
ggcatcagcggcctgacactcgacggtaagacgctgctcagccacgacctgagcctgatg
gacgcaccactggccggcattgtgctgttcgccgcagacctggaactgcaccacagcgca
gtgcccgtggtggcgtacattcccggcgacccacaggcaccgctcaagtattaccacgat
ggcatcgcattcattcaagacctgatccgcaaattgcgcgatgccgattaccaggcattc
ttcagccgctttataagccacgagcaccgcgcctacttctttgccaacctgcataaccgc
ttgtctcaggttacctggcatcaccccgtccccggcgaccccaggccgacctggcgcgcc
gaacctgtggccaaccccaacctgcagttgcacgcgacgaaaatcacgggcgagctgtac
gaacacctctatgaaaccaaactcaataagctgctcaatgacgcgcgaagcatcgccgtg
tccaccgccgacgccgacagcaaggcacgctggcagcgctgggccatcgtgcagaaaatc
ggtaaggccctgctcgaaatcgccgccttcatcgccacgccgttcattccccccctgggc
ttactgatgctcggctacaccgcctatcaactgctcgatgacgtattcgaaggcatcgtc
gattgggccgagggtctcaagcgccaggcgttcgggcacctgatgtcgaccctggagcaa
atggtgcaattgggtatgttcgcggtcggcgcaccgattgccgaagggctgctacgccag
gcactgcctcgggaagtctgggcgtttttcgagcgccttcatccggtcagctcggacgac
ggcaaaacgcgcctgtggaacccagacctgagcccctacgcccacgaccttcaattgccc
accgcctcgcgccccaaggcggatggattgcatgcctacggggacaagcagatcctgccc
cttgaagggcaacactttgccgtcaagcaacaagcgggcaacgccgtgctggcgcaccca
agccatgcgcatgcctaccaaccgcccgttatcggcaatggcaaaggcgcctggataacc
ccactggatcacccgctgacatggcatcgcagcaccttgttgcgcagactcggcgagccc
gccaacgctctcagcgaaaccggtctggaacaggcgcagcgcatcagtagcaccgacgat
ggtgccctgcgcaaactctacatggaccgccaaccgccaccgcccttgctggccgacagc
ctcaagcgcatccatatcgaccagcaactgcaagacttcatcgaccagatgaacagcgac
gacccactggtttacgcaaaagccgacacgcaaacccaactctggctgcttagccagacc
ggcctgtggccggaatccaagaccctgcgctttctgaatgccaaaggcgaaaccgtatgg
gaacacccaggcagggaaaatgcggcggtagcgcaaattcatgaagcgcagatgaacaac
ggcgacctgctcaagaccctgctggaaaccctcgacgagtcagagcgcaagactgtgctg
gaggaagacttcggtagcccggccccccaactgcatgtgcgcgccgccaagctgcgcaaa
cagctggcacgcagagccgaggataaacgcgcttcgatgttcgacgcgcgctatcgaggc
ctggagctgaccaccgatgcgcgcgtgcaaaagctcatcgacagcacaccgggcctgccc
gtcagcgcggccgaggaggtcctgctcagtgcccacggccaggacttgctcgacatcgac
cagggcacgctgccttcgcacctggtcgaacgcgcacgctgggcggcccatcaggtcaga
atcagccgggcctatgaaggcctgtacatgggtgcgctggagaccggcgacacccatcga
ctcgccctgcactccctggaaaaattgccgggctggtcgcctcaggtgcgtctggaagtt
cgcgacttcaagcgcgatggtcacctgcgcgacgctatcggccccgcccaggcgcccatc
cgacgcctgctgctgcgcaccatcgaaggcgattacattcccgaagacagcaagggcacc
ctgcttggtgaaaccgatttctacaccgccgtgctccaggcactccccgatgcacagcgc
gacgcactggctatgcagataggccaaggcccgcacttgagagaaaccttgcgccaacac
acattggcacatgacgaacttggcgccctgctggccgaagttccgctgctcaaaccgtcc
tatgacccgacattggtgcgcctacccggcggcatggagggctacgacgccagcccggtc
accgctggcagcagcgaaggggtctcgctggagagtcagttgcatgccctgtacccacaa
ctgagccccagccaggtgacggccgtactcgccgccatgcaaaacgatcccggcacacct
tggggtacccttcaatttctgaagaaagagttctcgcaactggaaaccaacctgcggaca
tggcagcagaatgtgccgcagacccttgtcggtacagatttaccgttgagccgctggcgg
attgctgcggaacagcaaaatcgctttctctggtcacaaaaactgatcggcgcctggcgc
cacaacacccccgtagaccctgcttatgacaacggtcacctgctgcaactcaaccagccc
atttatggggaactgcccgcgctcgatacccgccttgggcacatcactaccctggaattc
cagggttacttgaccacccgcggcacgccgggcttcctggcatctttccccggattgcgc
cgactggccatcagcgacatgaccctcagaacactgcccggcgaaatcagtgcattgacc
caccttaacgcgctgacactgcgcggctgcgcactcaacctgaccaccccaacccgagca
gccctggccaacctgaccgagctgcatacccttgacctgtcccacaacccgctggtgctg
gcgcccaatttcgaaaacatggccaacctgcgaacactcaacctgagccactgcggtatt
tccatctttcccacaggcctgctcaatcggcctcggctggcaaacgccaatctcagccac
aataacctgcgcaggctgccagaagccctgtattcgttgcccgccagtgctgccaaggcc
tacgacctttccggcaacccgctgacgcgcgcaaccctggaacggataaaaacctactgc
cagagcaccggggaacattttggcgtccaagccaatccagatgaggttcgcctggtccaa
gcgctttacccgacctacaacgttcccgaggccaatcaatttatcttcaggctaccgggc
gggctggatgattcgatggcgaatctcgtgcgcctcaaggccgactacgaacgcttgcaa
gccgacctgcaggaatgggtggtggatgtgcctgagagccaccccgtcacgaacctgccc
atggatgaacagattcgcccacagcaacaactcattcgagcggaaatccgcgctctgctg
gagcaaggctggcggcgtgaaaccagcctggacttaagccatgacccgctgacgcagtcc
catcaaatgacattgaccttgccgctgtggggagacctgccaagactgaatgtggatttc
aagcatatttccaagctggagctgagggcacaggaaaccacctcgatacccgaaggtttt
ctggaacgtttccccaatctggaaagcctgctgatccaccgctatgccctgcaagacatt
cccgctggcgtcttcaagctgcccaagttgaccacactcagcctcacgcaatgcaatctg
cgactgacccccgacagcgtcgccgccttgagcgacctgcacgacctggagtacctggac
ctgagcgataacccgctggcgctgacgcccgacgtcagcaaaatgtccggcctggaaacc
ctgatgatggaaaacaccaggcttaccgaggtgcctcacggggtgttcaacctgacgtcg
ctcacccaactgaacctgagcgataaccacatcaccgagttgcccacggacctgcttgaa
gtagacccggactcagcggcaggctttgacctgagcgacaaccccttctcacccgcagca
cttgccattctgcgtcgctattacaaccgcacggcagtggatttcgatgtagcgcaagcc
cgacaacccgcgccagaccgctccagctcacgctctgcgacgtcatccgaaacagaggga
gaagaatag
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