KEGG   Pseudomonas ogarae: PSF113_0198
Entry
PSF113_0198       CDS       T01734                                 
Symbol
foxI
Name
(GenBank) FoxI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfe  Pseudomonas ogarae
Pathway
pfe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pfe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSF113_0198 (foxI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfe03021]
    PSF113_0198 (foxI)
Transcription machinery [BR:pfe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSF113_0198 (foxI)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_29 GerE HTH_24 HTH_28 HTH_Tnp_ISL3 HTH_11 Xre-like-HTH HTH_40 HTH_31 OsmC HTH_7 PCI
Other DBs
NCBI-ProteinID: AEV60229
LinkDB
Position
complement(218133..218633)
AA seq 166 aa
MSSPEFAVQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFVRLLQRSERLELRAPRAFL
RTIAQGLVIDHWRREEIERAYLQTIAHLPEAETPGAEAQALILELLEAIARMLEGLKPKV
RRAFLLAQCEGLTYKQIAEQMGISLRSVERYVADALYHCYVLRYES
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtcatctcccgagtttgcagtacaggcgctctacagccgtcatcacggctggctcaat
acgtggctgcgcacccgtctgggcaacgccgccgatgcggcggacctggcccaagacacc
ttcgtgcgcctgttgcagcgtagcgaacgcctggaacttcgagccccacgcgcctttttg
cgcaccatcgcccaaggcctggtgatcgaccattggcggcgagaagaaatcgaacgcgcc
tacctccaaaccatagctcacttgccggaagccgaaacccctggcgctgaagcccaggcc
ctgattctggaactgctcgaagccattgccagaatgctcgaaggcctcaagccgaaagta
cgcagggcctttctgttggcccagtgcgaaggcctgacgtacaagcagattgccgaacag
atgggcatctcgttgcgctcggtggagcgctacgtcgccgatgcgctgtaccactgctat
gtgctgcgctatgaaagctga

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