Pseudomonas ogarae: PSF113_0198
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Entry
PSF113_0198 CDS
T01734
Symbol
foxI
Name
(GenBank) FoxI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfe
Pseudomonas ogarae
Pathway
pfe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSF113_0198 (foxI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfe03021
]
PSF113_0198 (foxI)
Transcription machinery [BR:
pfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSF113_0198 (foxI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_29
GerE
HTH_24
HTH_28
HTH_Tnp_ISL3
HTH_11
Xre-like-HTH
HTH_40
HTH_31
OsmC
HTH_7
PCI
Motif
Other DBs
NCBI-ProteinID:
AEV60229
LinkDB
All DBs
Position
complement(218133..218633)
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AA seq
166 aa
AA seq
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MSSPEFAVQALYSRHHGWLNTWLRTRLGNAADAADLAQDTFVRLLQRSERLELRAPRAFL
RTIAQGLVIDHWRREEIERAYLQTIAHLPEAETPGAEAQALILELLEAIARMLEGLKPKV
RRAFLLAQCEGLTYKQIAEQMGISLRSVERYVADALYHCYVLRYES
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcccgagtttgcagtacaggcgctctacagccgtcatcacggctggctcaat
acgtggctgcgcacccgtctgggcaacgccgccgatgcggcggacctggcccaagacacc
ttcgtgcgcctgttgcagcgtagcgaacgcctggaacttcgagccccacgcgcctttttg
cgcaccatcgcccaaggcctggtgatcgaccattggcggcgagaagaaatcgaacgcgcc
tacctccaaaccatagctcacttgccggaagccgaaacccctggcgctgaagcccaggcc
ctgattctggaactgctcgaagccattgccagaatgctcgaaggcctcaagccgaaagta
cgcagggcctttctgttggcccagtgcgaaggcctgacgtacaagcagattgccgaacag
atgggcatctcgttgcgctcggtggagcgctacgtcgccgatgcgctgtaccactgctat
gtgctgcgctatgaaagctga
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integrated database retrieval system