Pseudomonas ogarae: PSF113_2783
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Entry
PSF113_2783 CDS
T01734
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
pfe
Pseudomonas ogarae
Pathway
pfe00500
Starch and sucrose metabolism
pfe01100
Metabolic pathways
pfe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
PSF113_2783
Enzymes [BR:
pfe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
PSF113_2783
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Glyco_hydro_31_2nd
GHL5
Motif
Other DBs
NCBI-ProteinID:
AEV62787
LinkDB
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Position
complement(3274300..3276459)
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AA seq
719 aa
AA seq
DB search
MTRPNKTTPPPVIEASRIREGLPFPLGATWDGLGVNFALFSANATKVELCIFDDAGEVEL
ERIELPEYTDEIYHGYLPDAHPGLIYGYRVYGPYDPANGHRFNPNKLLIDPYAKQLVGQL
KWSEALFGYTIGHPDGDLSFDERDSAPFVPKCKVIDPAHTWGHDHRVSVPWDKTILYETH
VRGLTMRHPSVPENLRGTFAGLMVDDVLEHVRKLGVSSVELLPIHAFVNDQHLLHKGMTN
YWGYNSIAFFAPDPRYLASGKIAEFKEMVAHLHEANLEVILDVVYNHTAEGNEQGPTLSM
RGIDNASYYRLMPDDKRYYINDSGTGNTLDLSHPCVLQMVTDSLRYWATEMHVDGFRFDL
ATILGRYHDGFDERHSFLVACRQDPVLRQVKMIAEPWDCGPGGYQVGRFPPGWVEWNDKF
RDTVRAFWKGDDGQLADFASRMTASGEMFNQRGRRPYASVNFVTAHDGFTLHDLVSYNDK
HNEANDENNQDGSNNNLSWNHGVEGPTDDPEINALRHRQMRNFFATLLLAQGTPMIVAGD
EFARTQHGNNNAYCQDSEIGWVNWDLSEDGATLLKFVKRLIKLRLTYPILRRGRFLVGNY
NEDIGVKDVTWLSPDGSEMTIEQWQDGHGRCLGMLMDGRAQETGIRRKGGDATLLLVVNA
HHDIVNFRLPEVPEGSFWTCMVDTNQPTVRGQERFDFDSEYSVTGRSLLLFELQREEEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccaaacaaaaccacgccgccgcccgtgatcgaggcttcgcggattcgtgaa
gggctgccttttccactgggtgcaacctgggatggcctcggggtcaatttcgcgctgttt
tcagccaatgccaccaaggtggaactgtgcattttcgatgatgccggcgaagtcgaactc
gaacgcatcgagctgccggagtacaccgacgagatttaccacggctatctgccggacgcc
catccagggttgatctatggctaccgcgtctacggcccatacgacccggcgaacggccac
cgtttcaatccgaacaagctgctgatcgacccgtatgccaagcaactggtcggccaattg
aagtggtccgaagccctcttcggctacaccattggccatcccgatggcgacctcagtttc
gatgagcgcgacagcgccccgttcgtccccaagtgcaaggtcatcgacccggcgcacacc
tggggtcacgaccatcgcgtcagcgttccctgggacaagaccatcctgtatgagacccac
gtacgcggcctcaccatgcgtcacccttcggtacccgagaacctgcgcggtacgttcgcc
gggctgatggtcgacgatgtgctggagcatgtccgcaagctgggtgtctcgtcggtggaa
ctgctgcccatccatgccttcgtcaatgaccagcacctgctgcacaaaggcatgaccaac
tactggggttacaacagcatcgccttctttgccccggacccacgttacctggccagcggc
aagatcgccgagttcaaggagatggtcgcacacctgcacgaggccaatctggaagtcatc
ctcgacgtggtctacaaccacactgccgaaggcaacgaacagggccccaccctgtccatg
cgcggcatcgataacgcttcgtactaccggctgatgcccgacgacaaacgctactacatc
aacgattccggcacaggcaataccctggacctcagccatccgtgcgtcctgcaaatggtc
accgactccctgcgctattgggccactgagatgcacgtcgatggtttccgcttcgacctg
gcgaccatcctgggccgttaccatgacggcttcgacgagcgccacagcttccttgtggcc
tgtcgccaggacccggtgctgcgccaggtgaaaatgatcgccgagccttgggactgcggc
cccggcggctaccaggtgggacgcttcccgccgggctgggtcgagtggaacgacaagttc
cgcgacacagtgcgcgccttctggaagggtgacgacggccagcttgccgatttcgccagc
cgaatgacggcttcgggcgaaatgttcaaccagcgtgggcggcgtccgtacgcctcggtg
aacttcgtcaccgcccatgacggtttcaccttgcatgacctggtgtcgtacaacgacaag
cacaacgaggccaacgacgagaacaaccaggacggcagcaataacaacctgtcctggaac
catggcgtcgaaggcccgacagacgatccagagatcaacgccctgcgccatcggcagatg
cgcaacttcttcgccaccctgctactggcccaaggcacgccgatgatcgtcgccggcgac
gaatttgcccgtacccagcatggcaataacaatgcctactgccaggacagtgagatcggc
tgggtcaattgggacctgagcgaggatggcgcgacgctgctcaagttcgtcaagcgcctg
atcaagttgcgcctgacctacccgatcctgcggcgcggacggttcctggtgggtaactac
aacgaggatatcggcgtcaaggacgtgacctggctgtcccccgacggcagcgaaatgacc
attgaacaatggcaggacggccatggtcgctgcctcggcatgttgatggacggccgcgct
caggaaaccggcattcggcgcaagggcggcgatgcgacgctgctgctggtggtcaacgcg
caccatgacatcgtcaacttccgcctgccggaagtccccgagggcagtttctggacctgc
atggtcgacaccaaccagccgactgttcgtggccaggagcgcttcgatttcgattccgaa
tactccgtcaccgggcgctcgctgctgctgttcgaactgcaacgcgaagaagaggaatga
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