Pseudomonas ogarae: PSF113_4727
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Entry
PSF113_4727 CDS
T01734
Name
(GenBank) DNA-binding protein HU, form N
KO
K03530
DNA-binding protein HU-beta
Organism
pfe
Pseudomonas ogarae
Brite
KEGG Orthology (KO) [BR:
pfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfe03032
]
PSF113_4727
03036 Chromosome and associated proteins [BR:
pfe03036
]
PSF113_4727
03400 DNA repair and recombination proteins [BR:
pfe03400
]
PSF113_4727
DNA replication proteins [BR:
pfe03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSF113_4727
Chromosome and associated proteins [BR:
pfe03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PSF113_4727
DNA repair and recombination proteins [BR:
pfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PSF113_4727
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEV64716
LinkDB
All DBs
Position
complement(5505000..5505281)
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADLAESVDAPKATVRSLLDQLGQVVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaactgatcgctgatttggctgaatctgtagacgcaccaaaa
gctaccgtgcgttcgctgctggaccaactgggccaagtcgttgccgatcagctggaaaat
ggcggcgaaatcactctgccaggcgttggcaagctgaaagtcaccgagcgtcctgcccgt
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtgatcaag
ctggttgtggccaaaggcctgaccgacgcggtcaacaagtaa
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