Paracoccus ferrooxidans: E3U26_13730
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Entry
E3U26_13730 CDS
T09619
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pfeo
Paracoccus ferrooxidans
Brite
KEGG Orthology (KO) [BR:
pfeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfeo03000
]
E3U26_13730
Transcription factors [BR:
pfeo03000
]
Prokaryotic type
Helix-turn-helix
Other families
E3U26_13730
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
HTH_30
HTH_28
NPP
Mg_chelatase
HTH_IclR
IstB_IS21
AAA_16
HTH_29
HTH_23
AAA_2
AAA_19
AAA
nSTAND3
TsaE
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
WGR61829
LinkDB
All DBs
Position
pFER3:complement(148332..150188)
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AA seq
618 aa
AA seq
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MGGMQDTGTHVLEIFRAAEGQSSRRDADVLASWRRCVNEHRLDPTRHLGPRIVTQGELRQ
HRQESEELLRTARHGMEDLYRRVNSMGYVLLLANARGVTVDAIGDAQLDRELRHAGLITG
SEWHERDVGTNGVGACLASGRAITVHRSDHFDVTLTPLSCTAVPIHDTQGNLMGVLDLSH
LHAPQDKISQALTLEVMKSCARRIEMANLVCNHRSDWILRLHPSPEFLDVDPMAAVAVGA
DGRITGMTHNAHELVNRDLIGRPFSEVFAHEFEDLPVLSAALAPVEGVLEMQSGGILFAR
AVPPTAPPRSPAGAAALPAPLLAIHGGDPAMQRLAERAAKVVDRKISVILRGETGTGKEF
IARAMHQSSRRRGPFVAINCAALPEALIESELFGYVPNAFTGAHARGKKGLIHQANGGTL
FLDEIGDMSLPLQGRLLRVLAEHEVLPVGGTRVEPVDIRVISASHRDLAAQVAEGSFRQD
LFYRLNGLVLDVPPVRARADLEWLIDRIAAATEERIGFTPPARQRLLAHDWPGNVREIIN
VCELCAALCEGRPVQPDDLPAHIAAAAGQPDRQSEHELLECLRQCRGNLSAAARLAGVDR
STFYRRLHRAGLMDRRQG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtatgcaggacacggggacgcatgtccttgaaatctttcgcgcggccgaaggg
caatcctcgcgccgcgacgcggatgttctggcgtcctggcggcgctgcgtgaacgaacac
cggcttgacccgacccggcacctgggaccgcgcatcgtcacccagggcgagttgcgccag
caccgccaggaatccgaggaactgctgcgcacggcccggcacgggatggaggatctgtat
cgccgggtcaactcgatgggctatgtgctgctgctggccaatgcgcgcggcgtgaccgtg
gacgccatcggcgacgcgcagctggaccgcgaattgcgccatgccgggctgatcaccggc
tcggaatggcacgagcgcgacgtcggcaccaacggcgtcggcgcctgcctggcctcgggc
cgggcgatcaccgtgcatcgcagcgatcatttcgacgtgacgctgacgccgctgtcctgc
acggcggtcccgatccacgacacccagggcaacctgatgggcgtgctggacctgtcgcac
ctgcacgcgccgcaggacaagatcagccaggcgctgacgctggaggtgatgaaatcctgc
gcccgccgcatcgagatggcgaacctggtctgcaaccaccgctcggactggatcctgcgg
ctgcatccctcgcccgaattcctggacgtggacccgatggcggcggtggcggtcggcgcg
gacggccgcatcaccggcatgacccataacgcgcatgagctggtgaaccgcgatctgatc
ggccgccccttcagcgaggtcttcgcccatgaattcgaggatctgccggtgctgtccgcg
gccctggccccggtcgagggcgtgctggagatgcagtcgggcggcatcctcttcgcccgc
gccgtgccgcccaccgcgccgccgcgcagccccgccggcgcggccgccctgcccgcgccg
ctgcttgccattcacggcggcgaccccgccatgcagcgcctggccgagcgcgccgccaag
gtggtggaccgcaagatcagcgtgatcctgcgcggcgagaccgggaccggcaaggaattc
atcgcccgcgcgatgcaccagtcctcgcgccggcgcggccccttcgtggccatcaactgc
gccgccctgcccgaggcgctgatcgaatccgaactgttcggctatgtcccgaacgccttc
accggcgcccatgcgcgcggcaagaagggcctgatccaccaggcgaacggcggcacgctt
ttcctggacgagatcggcgacatgtccctgcccctgcagggccggctgctgcgcgtgctg
gccgagcacgaggtgctgcccgtcggcggaacccgcgtcgagccggtcgacatccgcgtc
atctcggcctcgcatcgcgacctggcggcgcaggtggccgagggcagcttccgccaggat
ctcttctatcgcctgaacgggctggtgctggacgtgcccccggtgcgcgcccgcgccgac
ctggaatggctgatcgaccgcatcgccgccgcgaccgaggaaaggatcggcttcacgccc
cccgccaggcagcggctgctggcccatgactggccgggcaacgtgcgggaaatcatcaac
gtctgcgaactctgcgcagccctgtgcgagggccgcccggtccagccggacgacctgccc
gcccatatcgccgccgccgcggggcagccggaccggcaatcggaacatgagctgctggaa
tgcctcaggcaatgccgcggcaacctgtcggcggcggcgcggctggccggggtcgatcgc
tcgaccttctaccgcaggctgcaccgcgccggcctgatggaccgccggcaaggctag
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