Paludibaculum fermentans: IRI77_14730
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Entry
IRI77_14730 CDS
T06895
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pfer
Paludibaculum fermentans
Pathway
pfer03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IRI77_14730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfer03400
]
IRI77_14730
DNA repair and recombination proteins [BR:
pfer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IRI77_14730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
SCAB_CC
Motif
Other DBs
NCBI-ProteinID:
QOY91148
UniProt:
A0A7S7SNQ1
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All DBs
Position
complement(3774018..3774854)
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AA seq
278 aa
AA seq
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MAASTVWKGYISFGLVSFPVRLTSAARAERVRFHMLHRKDLSRVKEVWFCAEEDKRIERT
DVVKGYELDNGNYIVVEDEELKKIAPPTATTMEILQFVSKDEVDPIFFESSYYVTGEGKA
AKPYALFTAALEETNQDAVAKLAMHNREHVVLIRPSEGGLILHTLFYPDELHQTNRSETP
KSKYTARELELAKGLIKQMKAPFQSQEFTDGYRANVERLLLEKQKGRKITSIRQPRKAPV
IDLMDALRRSLKSGAGKVAAKGHAKPAAHKASGRRKAG
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcgacagtctggaagggttacatcagctttggcctcgtatcgtttccggta
cggctcacctcggctgcccgggccgagagggtgcgttttcatatgctccacaggaaagac
ctctcgcgcgtgaaagaagtctggttctgcgccgaggaagataagcgcatcgaacgcacg
gacgttgtcaaaggctacgagctggacaacggcaactacatcgtcgtggaggatgaggaa
ttgaagaagatagcgcccccaacggcgaccaccatggaaatcctgcagtttgtaagcaag
gatgaggtggacccgatcttcttcgagagctcctactacgtcaccggcgaaggcaaggcg
gcaaagccctacgcgctattcacggccgccctggaagagacaaaccaggacgcggtcgcc
aagctggccatgcacaaccgcgaacacgttgtgctcatccggccctccgaagggggcctc
atcctccacaccctgttctacccggatgagcttcaccaaaccaacagaagcgagacgccc
aaatcgaaatacaccgcccgggaactggagctggcgaagggcctgatcaaacagatgaag
gcgcccttccagtcgcaggagttcaccgacggctaccgggcaaatgtagaacgccttctg
ttggaaaagcagaaaggcaggaagatcaccagcatccggcagcctcgcaaggcgcccgtg
atcgatctgatggatgccctcaggcgcagcctgaaatcaggggcggggaaagtggcggcc
aaaggtcatgccaagccggcagcccataaggcatccgggcggcgcaaggccgggtaa
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