KEGG   Paludibaculum fermentans: IRI77_14730
Entry
IRI77_14730       CDS       T06895                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pfer  Paludibaculum fermentans
Pathway
pfer03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pfer00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    IRI77_14730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pfer03400]
    IRI77_14730
DNA repair and recombination proteins [BR:pfer03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     IRI77_14730
SSDB
Motif
Pfam: Ku SCAB_CC
Other DBs
NCBI-ProteinID: QOY91148
UniProt: A0A7S7SNQ1
LinkDB
Position
complement(3774018..3774854)
AA seq 278 aa
MAASTVWKGYISFGLVSFPVRLTSAARAERVRFHMLHRKDLSRVKEVWFCAEEDKRIERT
DVVKGYELDNGNYIVVEDEELKKIAPPTATTMEILQFVSKDEVDPIFFESSYYVTGEGKA
AKPYALFTAALEETNQDAVAKLAMHNREHVVLIRPSEGGLILHTLFYPDELHQTNRSETP
KSKYTARELELAKGLIKQMKAPFQSQEFTDGYRANVERLLLEKQKGRKITSIRQPRKAPV
IDLMDALRRSLKSGAGKVAAKGHAKPAAHKASGRRKAG
NT seq 837 nt   +upstreamnt  +downstreamnt
atggcggcatcgacagtctggaagggttacatcagctttggcctcgtatcgtttccggta
cggctcacctcggctgcccgggccgagagggtgcgttttcatatgctccacaggaaagac
ctctcgcgcgtgaaagaagtctggttctgcgccgaggaagataagcgcatcgaacgcacg
gacgttgtcaaaggctacgagctggacaacggcaactacatcgtcgtggaggatgaggaa
ttgaagaagatagcgcccccaacggcgaccaccatggaaatcctgcagtttgtaagcaag
gatgaggtggacccgatcttcttcgagagctcctactacgtcaccggcgaaggcaaggcg
gcaaagccctacgcgctattcacggccgccctggaagagacaaaccaggacgcggtcgcc
aagctggccatgcacaaccgcgaacacgttgtgctcatccggccctccgaagggggcctc
atcctccacaccctgttctacccggatgagcttcaccaaaccaacagaagcgagacgccc
aaatcgaaatacaccgcccgggaactggagctggcgaagggcctgatcaaacagatgaag
gcgcccttccagtcgcaggagttcaccgacggctaccgggcaaatgtagaacgccttctg
ttggaaaagcagaaaggcaggaagatcaccagcatccggcagcctcgcaaggcgcccgtg
atcgatctgatggatgccctcaggcgcagcctgaaatcaggggcggggaaagtggcggcc
aaaggtcatgccaagccggcagcccataaggcatccgggcggcgcaaggccgggtaa

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