Pseudocercospora fijiensis: MYCFIDRAFT_216933
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Entry
MYCFIDRAFT_216933 CDS
T03109
Name
(RefSeq) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pfj
Pseudocercospora fijiensis
Pathway
pfj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYCFIDRAFT_216933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfj03032
]
MYCFIDRAFT_216933
03400 DNA repair and recombination proteins [BR:
pfj03400
]
MYCFIDRAFT_216933
Enzymes [BR:
pfj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MYCFIDRAFT_216933
DNA replication proteins [BR:
pfj03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
MYCFIDRAFT_216933
DNA repair and recombination proteins [BR:
pfj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
MYCFIDRAFT_216933
Bloom's syndrome complex (BTR)
MYCFIDRAFT_216933
FA (Fanconi anemia) pathway
MYCFIDRAFT_216933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RQC
RecQ_Zn_bind
Helicase_C
ResIII
HRDC
Motif
Other DBs
NCBI-GeneID:
19338334
NCBI-ProteinID:
XP_007931695
JGI:
216933
UniProt:
M2YJN0
LinkDB
All DBs
Position
Unknown
AA seq
1607 aa
AA seq
DB search
MTRNNLNEHLLWLLFDKPSLPPENLDLPPATISFTSAVEPPPASEPDQEITSSRGSGSRP
AGARPNPPEVVPSESHQQRSQQPREVNAALAHVNENSDDMVRMRTAPTSASKQHSAASVP
GHLDGTPSKNWRSASELAGASTSRGKMIGPTPMQKKLQSFDDIEEMDLTEDFASICSPPA
KRSLPDVAGKKRTSDEFELAIRSPSGSSKRPADKPRKAPRLSQEFTAIDDIVLDSPAKTG
AAPSDPPPPYSTLAPLKRATPVRQPEVPYHVAPRSAKKETFVDDSEDDDDLLNLSGHKMN
LSGKKLNPASNVEATPSKKPSAKTRSPTKEISMSDAAPATKSSLQPTVRYPDLTVTPVQS
NVTTPVPPASVLTQVIAPEMAESQAQLIQIFELPDFAYEEALQGIEILRDAVCNEMTEAL
DEGQDDVTSFETQLDALDSRRDALASLQTKRSTHRKLVEEKESLKQALGLAVRQRSKDLS
AHTAANKEGKERLTRFEVDCVSLLQSCSEDVKTMLSRREARSQATKSQKVAVQSTQVPTL
RQPSDHAPAMSSSSRVVQTQIQNFMPPPPRNNHSECSTIRHEDVYDDDLDDNDMIDADTS
HFGHRMGTPPAQYDNDDDYGMEDDEEMLDFVEGYENTSLSKAPVYRQPFAETSGNSQMRP
PSAMKAKKAPAKKSQAEEDELQRQKMSFRWSPDVGRVLRHVFKLKGFRKNQLEAINATLE
GQDVFVLMPTGGGKSLTYQLPALVPTGKTQGVTIVISPLLSLMQDQVEHLRKLGVQATLI
NSETSREERDLIMDALWDREPERMVQLLYVTPEMLGKSEKMLRTFEGLHRKRKLARIVID
EAHCVSQWGHDFRPDYKNLGEVRQRFPGVPVMALTATATEIVKSDTIHNLSMDGCAVFTS
SFNRTNLSYSVLPKPKGKQDVQSMAEVIKKDHAKDTGIIYCLSRKNCEDIAAALVNEHRI
KAKHYHAGMDSIAKADVQKEWQAGHVHVIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYY
QETGRAGRDGKPSACYLYYGYGDAGKLRKMIDDGEGNWDQKDRQHQMLSKMVQYCENKSD
CRRVQVLGYFGEAFEPEDCLGGCDNCTSGSTFEEVDYTQHARDAISLVRELRDQKVTILH
CIDMFRGANTKKGRDAKHEKVAHFGKGEDLDRGDVERLFYRLVNEQAIVEESHKNKRGFV
LSYVNLGRRCNDFAPGKARLKMLIRSSPRATKIVKKPMKRRGDDTTVKALPMSTNVSSPV
QAVSKRKKAAAQSNVRQSRQANDYERDGFVVDDPSEDSFGEDAETETDDEYYAPAPQPIK
PQRKRIAPQPRGRTITIDDTMSNLSELHKDFVAQFEQEAEEKCKTLMNQNFHLKSQPFTN
TILRQMAIRWTETPEQMLRIPNIDRERVDRWGELFCKLVKKYHDHYREIMGAQAELEDDG
DDDEQPLDPNHQNVIDLVSEDEDEGGKEFEDFVDDEEEGVESQYFSVAQYKAPDVEDFNN
RLAGMSQSANKARAESQAAEKSTSRKGKNYSIRAANKANDENTYRRKFSGGSRGGRYAPG
SGSGSGTGRKRTSASSKSGGASAKNSRAPSRAQGGGFGTGSVRAMPT
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaacaacctgaacgagcatctgctgtggttgttgttcgacaaaccgtctctc
ccgcccgaaaacctcgacttgccgccggcgacgatatcattcacatctgcagttgagccg
ccgcctgcaagcgagcctgatcaggaaattacgtcctccagaggctccggatcacgacca
gcaggcgcgagaccaaatcctcctgaagttgttcctagtgaaagccaccagcagcggtca
cagcagccaagagaggtgaatgccgcactggcacatgtcaatgaaaattcggacgacatg
gtccgcatgagaacagcgcctacatcggccagcaagcagcacagtgccgcgtccgtgcca
ggccatctcgatggaacgccctccaagaactggcggtccgcttcagagctggcaggtgct
tctacgtctcggggaaagatgattggaccgacgccaatgcagaagaagcttcagagtttt
gacgacattgaggaaatggatttgactgaggactttgcctcgatatgcagtcctccagcg
aagagaagtttgccggatgtggctggcaagaagagaaccagcgatgagtttgagcttgcc
attcgtagtccgtctggctcttctaagcgtcccgctgataagccgaggaaagcaccacgt
ctctcgcaggagttcacggcaattgatgatatcgtcctggacagccctgctaagaccggt
gctgcaccgagtgatcctcctcccccatattcaactttggcgccactcaagcgagcaaca
cctgtccgacagccagaagttccatatcatgttgctccaagatctgccaagaaggaaact
tttgtggacgactctgaggacgatgacgaccttctcaacttgtctgggcacaagatgaac
ctttcaggcaagaagctgaatcctgcgtccaatgtcgaggcaactcctagcaagaagcct
tcggccaagacacgcagtccgaccaaggaaatctcgatgtccgatgctgctcctgccacc
aaatcgtcgctacagcctaccgttcgatatcccgatctgactgttacgcctgtccaaagc
aatgtcacgacgccagtgccgccagcgagtgttttgactcaggtcatagcaccggaaatg
gcagaatcacaagcgcagctcatacagatttttgagctgccagattttgcatatgaagaa
gcgcttcagggtattgagatccttcgtgatgctgtgtgcaatgagatgacagaggcattg
gatgagggtcaggacgacgtcaccagctttgagacccaactggacgctcttgactcccga
cgtgatgcactggcttctcttcagaccaaacgtagcacccaccgcaagcttgtcgaagag
aaagaaagcctcaagcaagctcttggcctcgcagtcaggcagcgcagcaaggacttgagc
gcccacacagcagctaacaaggaaggcaaagaacgtttgacccgctttgaagttgactgc
gtgtcacttctgcaatcctgcagcgaggatgtcaagaccatgttgagtcgaagagaagca
cgttctcaagctacaaagagccagaaggtggcagttcagtccacacaagtcccaacactt
cgccagccctcggaccatgcgccagctatgtcaagctcaagtcgagtcgtacagacgcag
atccagaatttcatgccgccaccacctcgaaataatcattctgagtgcagtacgatccgc
cacgaagatgtttatgacgacgacctagacgataacgacatgattgatgctgacacgagc
catttcggccaccgaatgggcactccacctgcgcagtatgacaacgacgatgattatgga
atggaagacgatgaggagatgcttgacttcgtggaaggatacgagaatacatccttgtca
aaggcacctgtgtatcgccagccttttgcagagacatctggcaatagtcagatgcgaccg
ccttccgccatgaaagcaaagaaggctcctgccaagaagtctcaggccgaggaagatgag
ctgcagcgacagaagatgagttttcgctggtcgccagatgtcggccgagtgttgagacat
gtcttcaaactcaaaggatttcgcaagaaccagctcgaagctatcaatgctacattggaa
ggccaagatgttttcgtacttatgccgactggaggtggcaagtctttgacttatcagctt
ccggcactcgtaccaacagggaagacccaaggtgtaacgattgtgatctcaccgctcttg
agcttgatgcaagaccaagtcgaacacctacgcaagcttggtgtacaggcaacgttgatc
aattccgagaccagtcgagaagagagagatctgatcatggatgctttgtgggacagagag
cccgagagaatggtgcagctgttatatgtgacgccggaaatgcttggcaagagcgagaag
atgctgcgaacattcgaaggactccatcgcaagcgcaaattggccagaatcgtgatcgat
gaagctcactgcgtgagtcaatggggtcacgacttccgacccgactacaagaaccttggc
gaggtgcggcaaagatttcctggtgtcccggtcatggcactgactgccactgcgacggag
atcgtcaaatccgatacgatccacaatctcagcatggatggttgcgcagtctttacttca
agtttcaaccgcaccaacctgtcatatagcgtattaccaaaaccgaaaggaaagcaggat
gttcagagcatggcggaggtgatcaaaaaggatcatgccaaggacactggcatcatctac
tgcctctcgagaaagaactgcgaggatattgctgccgctttggtgaacgagcatcgtatc
aaagccaagcattaccacgcaggcatggactcgatcgcgaaggctgatgtgcaaaaagaa
tggcaggctggacatgtccatgtcattgtcgcaacgatcgccttcggtatgggtatcgat
aaaagcaacgttcgcttcgtaattcatcacagcattcctaaatctttggagggctactac
caagagactggcagggcgggccgagacggcaagccatctgcgtgctatttatactatggc
tacggagatgcgggcaagcttcgcaagatgatcgatgacggcgaaggcaattgggaccag
aaggaccgccagcatcagatgctgtctaagatggtgcagtattgcgagaacaagagcgac
tgcagacgtgttcaggttctgggctactttggggaagctttcgagcctgaagattgtctt
ggcggatgcgacaattgcacttcaggatcaactttcgaggaagtggactatactcagcac
gctcgcgacgctatcagtctcgtgagagagcttcgagatcagaaagtcacgattctgcac
tgcatcgacatgttccgcggggccaataccaagaagggacgagatgctaaacacgagaaa
gttgcccatttcggtaaaggcgaagacctcgatcgtggcgatgtagaacgactgttctac
cgcctggtgaacgaacaagcaatcgtcgaagagagtcacaagaacaagagaggatttgtc
ctatcgtacgtcaaccttggccgccgatgcaatgactttgctccgggcaaggcaagactg
aaaatgctgattcgaagctcaccgcgcgctacgaagattgtcaagaaaccgatgaagagg
aggggcgatgatacgacagtgaaagcacttccaatgtcgaccaatgtatcgtcaccagtg
caggctgtgtccaagcgcaagaaggctgctgctcagtcaaatgtcagacagagccggcag
gccaatgactacgagcgtgatggcttcgttgtcgacgatccaagcgaagacagctttggc
gaagatgctgagactgaaactgatgatgagtactacgcacctgccccacagcccatcaaa
ccacagcgtaaaagaatcgcaccacaaccgcgtggaaggactatcacgatcgacgacacc
atgagcaatctctctgagctccacaaggatttcgtagcacaatttgagcaagaagctgag
gagaagtgcaagactctgatgaaccagaacttccacctgaaaagccaaccgttcaccaat
acgatattacgacaaatggcaatacgctggacagagacgccagaacaaatgcttcgtatc
ccgaacatcgatcgagaacgagtcgatcgatggggtgagctcttctgcaaactcgtcaag
aagtatcatgaccattatcgggagattatgggcgcgcaagcagagctggaagacgatggc
gatgacgatgaacagccgctcgatcccaaccatcagaatgtcatcgacctcgtgagcgaa
gacgaggacgagggaggaaaagaattcgaagacttcgtagatgacgaggaagagggtgtg
gagagtcaatacttttccgttgctcagtacaaggcaccagatgttgaagacttcaacaat
cggctcgcaggaatgtcacaatcggcgaataaagcgagagcggagtcacaagctgcggag
aagtcgacctctaggaaaggcaagaactacagcattcgagccgccaacaaagccaatgac
gaaaatacatatcgtcgcaagttctctggcggcagtcgtggcggtcgctatgcaccaggc
tctggctctggatctgggacaggcagaaagaggacatctgcgtctagcaagagcggcggc
gcttctgcaaaaaattcgcgcgcaccatctcgagcgcagggcggcggctttggtacgggc
tcagtcagagcgatgccgacttga
DBGET
integrated database retrieval system
