Pseudomonas protegens Pf-5: PFL_0512
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Entry
PFL_0512 CDS
T00249
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase I
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
pfl
Pseudomonas protegens Pf-5
Pathway
pfl00540
Lipopolysaccharide biosynthesis
pfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PFL_0512 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pfl01005
]
PFL_0512 (rfaC)
Enzymes [BR:
pfl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
PFL_0512 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
pfl01005
]
Core region
PFL_0512 (rfaC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
AAY95921
UniProt:
Q4KJC7
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All DBs
Position
598286..599347
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AA seq
353 aa
AA seq
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MRVLLIKTSSLGDVIHALPALTDAARAIPGIKFDWVVEEGFAEIPTWHPAVGKVIPVAIR
RWRKNIWQTIKSGEWRRFKQSVRSTKYDLVIDAQGLLKSAWLTRYVRAPVAGLDKNSARE
PLASRFYSRRLAVARGQHAVERVRQLFAVALGYDLPQGLGDYGLNVEKLVELPRKKPFVL
FLHGTTWDTKHWPEAYWRELTERMGMLGVEVKLPWGNPAEKARAERIASGLKNATVLPKL
NLAGVAKVLADAQACVAVDTGLGHLAAALDVPTISLFGPTNPGLTGAYGRVQIHLGSNFP
CAPCLQKKCTYQPTAVDQQRYDLKREWPLCFTRLNPERVASRLSTLLLAEEPR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtactgttgatcaagacctcgtccctgggggatgtgattcacgcattgccggcg
ctgaccgatgccgcgcgagccatccccgggatcaagttcgactgggtggtggaagaaggc
tttgccgaaattcccacctggcatccggcggtcggcaaggtgataccggtggcgatccgt
cgctggcgcaagaacatctggcagaccatcaagagtggcgagtggcgacgcttcaagcag
agcgtgcgctcgaccaagtacgacctggtgatcgatgcccaaggcctgctgaaaagcgcc
tggctgacccgctacgtgcgcgccccggtggcggggctggacaagaactcggcccgcgag
cctctggcttcacgcttctattcccggcgcctggcggtggcccgtgggcagcacgcggtg
gagcgcgtgcgccaactgttcgccgtggccctgggctacgacctgccccagggcctgggc
gactatggcctgaacgtcgaaaaactcgtggagttgccgcgcaagaagcccttcgtgctg
ttcctgcatggcaccacctgggacaccaagcactggcccgaggcctactggcgcgagctg
accgaacgcatgggcatgctcggcgtcgaggtcaagctgccctggggcaaccccgcggaa
aaggctcgcgccgagcgcatcgccagcggcctgaaaaacgccacggtgctgccgaagctg
aacctggccggggtcgccaaggtgctggccgatgcccaggcctgcgtggccgtggacacc
gggctgggccacctcgccgcggcactggatgtaccgaccatctcactgttcgggccgacc
aacccggggctgaccggcgcctatggccgtgtgcagatccacctgggcagtaacttcccg
tgcgcaccgtgcctgcagaagaaatgcacctatcagcccaccgctgtggaccagcagcgt
tatgacctcaagcgcgagtggccgctgtgcttcactcgcctgaatcccgagcgtgtcgcc
agccgactgagcaccctgttactggctgaggagccgcgctga
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