Phytohabitans flavus: Pflav_042200
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Entry
Pflav_042200 CDS
T06516
Symbol
ku_1
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
pfla
Phytohabitans flavus
Pathway
pfla03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Pflav_042200 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_042200 (ku_1)
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Pflav_042200 (ku_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BCB77810
UniProt:
A0A6F8XVG7
LinkDB
All DBs
Position
complement(4569669..4570559)
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AA seq
296 aa
AA seq
DB search
MARSIWSGVISFGLVSVPVRIYSATQEHEVSFHQFQKGTSDRIRYRRVNERTGKEVEFGD
IVKGADVGGGEYVMVEPDELDQIAPGRSRSIEVHAFVGLDEIDPVYYQKSYYLAPGSDDT
AKTYALLRDAMADANRAAIGTLVMRSKEYLAAIRPQDGLLVLETMHFADEVRNPRDELAS
LPGDTKPRPQELRMAAQLIDSMSSPWQPADYRDTYTDRVKELIDAKKEGAAVTLAEQAPE
ATNVTDLMDVLRRSVDAAKSARGTAKKAPPAKKKAAAPAKKAAPKKAAPRAKKKAA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcggtcgatctggagtggcgtgatcagtttcgggctggtgtcggtaccggtccgg
atctactcggcgacgcaggaacacgaggtgtcgttccaccagttccagaaaggcacgagt
gaccggatccggtaccggcgggtcaacgagcgcaccgggaaagaggtcgagttcggggac
atcgtcaagggcgcggacgtcggcggcggcgagtacgtgatggtcgagccggacgagctc
gaccagatcgcgccgggccgctcgcggtccatcgaggtgcacgcgttcgtcggcctggac
gagatcgaccctgtctactaccagaagtcgtactacctcgcgccgggcagcgacgacacc
gccaagacgtacgcgctgctgcgcgacgcgatggcggacgccaaccgggccgcgatcggc
acgctggtgatgcgcagcaaggagtacctggcggcgatccggccccaggacgggctgctg
gtgctggagacgatgcacttcgccgacgaggtacgcaatccgcgcgacgagctcgccagc
ctgcccggcgacacgaagccgcgcccgcaggagctgcggatggccgcccagctgatcgac
tccatgagcagcccgtggcagccggcggactaccgcgacacgtacaccgaccgggtcaag
gagctgatcgacgccaagaaggagggcgccgcggtcaccctggctgagcaggcgcccgag
gcgacgaacgtgaccgacctgatggacgtactgcgccgcagcgtcgacgcggccaagagc
gcacgcggtacggcgaagaaggcgccccccgcgaagaagaaggccgctgcccccgcgaag
aaggcggctcctaagaaggccgcgccccgcgcgaagaagaaagctgcctga
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