Phytohabitans flavus: Pflav_063040
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Entry
Pflav_063040 CDS
T06516
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfla
Phytohabitans flavus
Pathway
pfla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pflav_063040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfla03000
]
Pflav_063040
03400 DNA repair and recombination proteins [BR:
pfla03400
]
Pflav_063040
Enzymes [BR:
pfla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Pflav_063040
Transcription factors [BR:
pfla03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Pflav_063040
DNA repair and recombination proteins [BR:
pfla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pflav_063040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BCB79894
UniProt:
A0A6F8Y1B1
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All DBs
Position
6831022..6832482
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AA seq
486 aa
AA seq
DB search
MSENRELLARGPGTIDSVELDFERCYRAVDSRDGRFDGWFYTAVTSTGIYCRPSCPAVTP
KPENVRFYPSAAAAQRAGFRACKRCRPDAAPGSPEWDVRADVVGRAMRLISDGVVDRAGV
PGLASRLGYTERHLHRMLTAELGAGPLALARAQRAQTARILIETTDLGLAEIAFAAGFGS
VRQFNDTIREVFGSPPSALRKPRRGPAPEPGAIHLRLAYRPPLHAESLVEFLALRAIPGV
EEVDATTYRRALRLPHGCGTVELTPTPGYVAALLRLSDVRDLSPAVARCRRLLDLDADPV
AVDAVLAEDEALAASVAKEPGVRVPRSVDSFEMAVRAIVGQQISVVAARKVLSRLVPSGE
QLSPFPTPEEVLALPDEAFKMPGARRDTIRALASAVASGELDLDPGADREEAVHNLTKLP
GIGSWTASYVAMRGIGDPDSFLPTDLGVRRGAKALGLPDDPKALDAHAARWAPWRSYALI
RLWRQG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaaaccgcgagcttctggctcgcggtccgggcacgatcgacagcgtggagttg
gacttcgagcggtgctaccgggccgtggacagccgtgacgggcggttcgacggctggttc
tacaccgcggtcacctcgaccggcatctactgccggccgtcctgtcccgccgtcacgccg
aagccggaaaacgtgcgcttctacccgtccgcggccgccgcacagcgcgccggcttccgg
gcctgcaagcggtgccgcccggacgcggcgcccggctcgccggagtgggacgtccgcgcc
gacgtggtcggccgggcgatgcggctgatctccgacggcgtggtggaccgcgccggcgta
ccggggctggccagccgcctcggctacaccgagcggcacctgcaccggatgctcacggcc
gagctcggcgcggggccgctcgccctggcccgggcacagcgggcgcagaccgcgcgcatc
ctgatcgagacgaccgacctcgggctggccgagatcgcgttcgcggccgggttcggcagc
gtacggcagttcaacgacacgatccgcgaggtcttcgggtcgccgccgtcggcactgcgc
aagccgaggcggggaccggcacccgagcccggcgcgatccacctccgcctggcgtaccgg
ccgccgctgcacgccgagtcgctggtggagttcctggcgctgcgggcgataccgggcgtg
gaggaggtggacgcgacgacgtaccggcgggcgctgcgcctgccgcacggctgcggcacg
gtcgagctgaccccgacccccggctacgtggccgccctcctgcgcctctccgacgtacgc
gacctatcgccggccgtggcccgctgccgccggctgctcgacctggacgccgacccggtg
gcggtggacgccgtgctggccgaggacgaggcgctcgcggcctcggtcgcgaaagagccg
ggcgtacgggtgccccgctcggtggacagcttcgagatggcggtacgggcgatcgtcggc
cagcagatctcggtggtcgccgcccgcaaggtgctctcgcggcttgtgccctccggcgag
cagctcagcccgttccccacaccggaggaggtgctggcgctgccggacgaggcgttcaag
atgccgggcgcgcggcgggacacgatccgggcgctcgcgtcagcggtcgccagcggcgag
ctggacctcgacccgggcgcggaccgggaggaagccgtccacaacctcaccaagctgccc
ggcatcggctcctggaccgccagttacgtcgcgatgcgcgggatcggcgacccggactcg
ttcctccccaccgacctgggcgtgcgccggggcgcgaaggcgctcgggcttcccgacgat
ccgaaggcgctcgacgcgcacgccgcccgctgggcgccgtggcgctcgtacgccctgatc
cgactctggagacaaggatga
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