Pyrolobus fumarii: Pyrfu_0111
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Entry
Pyrfu_0111 CDS
T01620
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pfm
Pyrolobus fumarii
Brite
KEGG Orthology (KO) [BR:
pfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfm03019
]
Pyrfu_0111
03009 Ribosome biogenesis [BR:
pfm03009
]
Pyrfu_0111
04131 Membrane trafficking [BR:
pfm04131
]
Pyrfu_0111
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfm04147
]
Pyrfu_0111
Messenger RNA biogenesis [BR:
pfm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Pyrfu_0111
Ribosome biogenesis [BR:
pfm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Pyrfu_0111
Membrane trafficking [BR:
pfm04131
]
SNARE
SNARE associated proteins
Others
Pyrfu_0111
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Pyrfu_0111
Exosome [BR:
pfm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pyrfu_0111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_14
AAA_5
AAA_22
AAA_33
TIP49
Vps4_C
AAA_18
nSTAND3
IstB_IS21
AAA_24
RNA_helicase
AAA_28
ATPase_2
Mg_chelatase
AAA_17
NB-ARC
Sigma54_activat
TsaE
ABC_tran
AAA_3
AAA_7
DUF815
Parvo_NS1
UFD1
Bac_DnaA
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEM37983
UniProt:
G0EEE2
LinkDB
All DBs
Position
complement(102785..105001)
Genome browser
AA seq
738 aa
AA seq
DB search
MSTVAVRSKRPEVVLRVAEAKPKDVGKGKVRIDIDIMKMLGVEPGDVVEIEGKRVTAATV
WPSYPEDQGLRIIRMDGLTRKNAGVSIGDKVIVRKADAKPAQMVKLAPASFTITVDPGFV
SFVRKRLTDYPVVEGDSVMVPVVGHAIPFVVVKTRPSGVVVINNNTNIVILEKPVEQSNV
PRVTYEDIGGMKDVIQKVRELVELPLKHPELFKRLGIEPPKGILLYGPPGVGKTLLAKAI
ANETDAYFIAINGPEIMSKYYGESEQRLREIFEEAKKHAPAIIFIDEIDAIAPKRDEVIG
EVERRVVAQLLALMDGLESRGDVIVIAATNRPNAIDPALRRPGRFDREIEIPLPDKQGRL
EILQIHTRNMPLAEDVDLEKLAEMTKGFTGADLAALVREAAMHALRRYLPEIDLDKDTIP
PELLEKMEVRMEDFLAALREIVPSGLREIYVEVPEVHWDDIGGLEDVKQQLREAVEWPLK
HPEVFQRLGIRPPKGILLFGPPGVGKTLLAKAAATESGANFIAVRGPEILSKWVGESEKA
IREIFRKARQHAPAIIFFDEIDAIAPARAEVPDTSGVTYRIVNQLLTEIDGIVPLQNVVV
IAATNRPDILDPALLRPGRFDKIIYVPPPDKKARLEILRIHTRHTPLADDVDLEYIASVT
EGYSGADLEALVREAALAALREDINATKVHMRHFEEALKRVKPSITPEMVRFYEEWYEKA
RQQLPGVTVKKMKPNIYM
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgtagctgttaggtcgaagcgcccagaggttgtactgcgcgtagccgaggct
aagccaaaagatgttggtaaaggtaaggtacgaatcgacatcgacatcatgaagatgctt
ggtgtcgagcctggtgatgtcgtagaaatcgagggtaagagggtaacagccgcaaccgtt
tggccgagctatcccgaggatcagggactacggatcatcagaatggatggattgactaga
aagaatgctggtgtgagtataggagacaaggttatcgtgcgcaaggctgatgccaaacca
gctcagatggtaaagttagcgcccgcaagctttacaattactgtcgaccctggctttgtt
agcttcgtaaggaagagactaaccgattatcctgttgttgaaggagacagtgtcatggtt
ccagtggtcggccatgcaatcccgttcgtcgttgtcaagactaggccgtccggcgtcgta
gtaattaacaacaatacgaacatagtgatactggagaagcctgttgagcaaagcaacgtg
ccaagagtaacttacgaggatataggtggaatgaaagatgtgatacaaaaggtgcgagag
cttgtagaactgccattgaagcacccggagctcttcaagaggcttggcatagagcctccg
aagggcatcctgctctatgggcctcccggtgtaggcaagacgttgctagccaaagcgata
gctaacgagacagatgcatacttcattgctatcaacggcccggagataatgagcaagtac
tatggggagtccgagcagaggctacgtgagatattcgaggaggctaagaagcatgcacca
gccataatattcatcgatgagatcgacgcgatagcgcccaagagagatgaagtcataggt
gaggttgagagacgagttgtggctcagctactcgccctcatggatggcttagagagtaga
ggcgacgtgatagtaatcgctgcaactaatcggccgaatgccatagaccccgcgcttagg
aggcctggcaggttcgatagggaaatagagattccactaccagacaagcaaggaaggctt
gagatactccagatacacactcgtaacatgccattagccgaagacgtggatcttgagaag
ctagctgagatgaccaaggggttcacaggagcagatctggctgcgctcgtacgcgaagct
gccatgcatgcattgagacgatatctaccagagattgacctcgacaaagatacgatacca
ccggagctcctcgagaagatggaagtgcggatggaagacttcctggcggcattacgtgag
atagtgccaagtggtttacgtgagatctatgttgaggttcctgaggtgcattgggatgat
attggtggtcttgaggatgttaagcagcagcttcgtgaggctgtggagtggcccttgaag
cacccagaagtgttccagaggcttggtattcgtccgccgaaggggattctgctcttcggc
ccgccgggtgtcggcaagaccctgctcgcgaaggccgctgcaaccgagagcggcgccaac
ttcatagccgtgagaggcccagagatactctcaaagtgggtaggcgaaagcgaaaaagca
atacgagagatattccgcaaggccaggcagcatgcaccggcgataatcttctttgatgag
atcgacgcgatagcgccggcgcgtgcagaagtcccagatactagtggtgttacctaccgt
atagtcaaccagttgctgacagagatagatggtatagtgccgcttcagaatgtggttgtg
attgctgccactaacaggccggacatcctagacccggcgctactcagaccaggcagattc
gataagataatctatgtaccgccgccagacaagaaggcgaggctagagatactcaggata
cacactaggcatacaccgctagcggatgatgtggatctagagtacattgcaagcgtcact
gaaggatatagcggtgcagatctagaggcactggtgcgtgaggcagcgttagcggcgcta
agagaggatatcaacgccaccaaggtgcatatgaggcacttcgaggaggcgttaaagcgt
gtaaagccatcaataactcccgagatggttagattctatgaagagtggtacgagaaggct
agacaacaattacctggagtcacagtgaagaagatgaaaccgaacatctacatgtaa
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