Pseudomonas fluorescens UK4: HZ99_05130
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Entry
HZ99_05130 CDS
T03319
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pfn
Pseudomonas fluorescens UK4
Pathway
pfn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HZ99_05130 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfn03400
]
HZ99_05130 (uvrC)
DNA repair and recombination proteins [BR:
pfn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZ99_05130 (uvrC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
GIY-YIG
UVR
HHH
HHH_2
5_3_exonuc
GIY_YIG_2
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
AIG01577
LinkDB
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Position
complement(1205466..1207289)
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AA seq
607 aa
AA seq
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MTAAFDPSAFLATCSGRPGVYRMFDSEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALV
GRIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGDFPRLSIHRG
AKKHKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVG
LVEPQEYAEDVRHSVMFLEGRSNALADELSGAMEQAASVLDFERAAELRDQVSLLRRVQD
QQSMEGGTGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIEEEVAEVMAAFLG
QYYVSSPERDLPGELIVNVVHEDFPALIDAIHALRGRELDISHRVRGTRARWQQLAVTNA
EQALSARLANRQHVAARFEALADVLKLDEPPQRLECYDISHSSGEATVASCVVFGPEGPI
KSDYRRYNIEGVTPGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLN
ELAVPDLILLGVAKGATRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITG
HRARRGKTRRTSTLEGVAGVGPKRRRELLKHFGGLQELSRASIEEIAKAPGISKKLAELI
YANLHSE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ataaccgccgcgtttgatccgagtgcatttcttgccacctgcagtggccggccaggcgtg
tatcgcatgttcgacagcgaggcgcgcctgctgtacgtcggcaaggccaagaacctcaag
aagcgcctggccagctactttcgcaagaccggcctggcaccgaagaccgccgcgctggtg
gggcgtatagcccaggtcgaaacgaccatcactgccaatgaaaccgaggcattactgctt
gagcagacgctgatcaaggagtggcggccgccctacaatattttgttgcgtgacgataag
tcctacccgtacgtgttcctgtcggacggcgactttccgcgcctgagcattcatcgcggg
gcgaagaagcacaagggcaagtattttggcccttatcccagcgccggcgcgatccgcgag
agcctgagcctgctgcaaaaaaccttcttcgtacgccagtgcgaagacagcttctacaag
aaccgcacccgcccgtgcctgcaataccagatcaagcgctgcaaggcgccctgcgtcggg
ctggtggaaccgcaggagtatgccgaggacgtgcggcactcggtgatgttcctcgaagga
cgcagcaatgccctggccgacgagttatctggcgccatggaacaggcggccagtgttctt
gactttgagcgtgccgccgagttgcgtgaccaggtgtccttgctgcggcgcgtgcaggac
cagcagagcatggaaggcggtacaggtgatgttgatgtgatagcagcctttgtcaatccc
ggcggggcctgtgtgcacctgatcagcgtgcgtggtggccgggtgctgggcagcaagaac
ttttttccgcagacgggtattgaggaagaggtcgccgaggtcatggctgcgttccttggc
cagtactacgtcagtagccccgagcgcgatttgccgggcgaactgatcgtcaatgtggtg
cacgaagactttccagcgctgatcgatgcaatccacgcactgcgcggccgtgagctggac
atcagccaccgggtgcgcggtacccgtgcgcgctggcagcagttggcggtaaccaacgcc
gaacaggccctgagtgcacgcctggccaaccgccagcatgtggccgcgcgttttgaagcg
ctggccgacgtgctcaagctcgacgaaccaccgcagcgcctggagtgctacgacatcagc
cactccagcggcgaggcgactgtggcgtcctgcgtggtcttcggcccggaagggccgatc
aaatcggactatcgccgctataacatcgaaggtgtcacccccggcgatgactatgccgcc
atgcaccaggccttgacccggcgcttcagcaaactcaaggacggcgagggcaagctgccg
gatatcctcctggtggacggtggcaagggccagctctccatggcccgcgacgtgctcaat
gagctggcggtgcccgacctgatcctgcttggcgtggccaagggcgcgacccgcaaggcg
ggtttcgaaacgttgtacttgaatgatgcggcccatgagttcaccttgaagggcgactca
ccggcgctgcacctgattcagcagattcgcgacgaagcccaccgtttcgccatcaccggc
caccgtgcccgacgtggcaaaacccggcgtacctcaaccctggaaggggtcgcaggcgta
ggcccaaagcggcggcgtgaattgttgaaacattttggtggattgcaggaattgtcccgt
gccagcattgaagaaatagccaaagcccccggtatcagtaaaaagctcgctgagttgatt
tatgcaaacctacacagcgagtag
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