Pseudomonas fluorescens Pf0-1: Pfl01_3883
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Entry
Pfl01_3883 CDS
T00283
Symbol
slt
Name
(GenBank) putative lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pfo
Pseudomonas fluorescens Pf0-1
Brite
KEGG Orthology (KO) [BR:
pfo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Pfl01_3883 (slt)
Enzymes [BR:
pfo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pfl01_3883 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfo01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pfl01_3883 (slt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
ABA75620
UniProt:
Q3K9D4
LinkDB
All DBs
Position
4390847..4392799
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AA seq
650 aa
AA seq
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MISLPGCLMRSRLFSVLSCLLLSAAAVQSAQAVDLSTQRQYYDEAKRALAKGDSGPYFRY
SQALADYPLEPYLAYDELTARLKTASNAEIEKFLAEHGDLPQANWMKLRWLRWLADRGDW
ATFVKYYDPKLNFTELDCLHAQYQISHNKKAEGYANAEKLWLTGKSQPAACDALFGMWAA
EGQLTEQKRWERAKLAAQHRNYPLANSLVNGLTTLAPRGRLLVDVAQKPELLNQPSRFMP
ADEPMSDVVSLGLRRLARQDPDKAMALLDGYASSMHFSRDEKVAIAREIGLTLARRFDSR
ALDVMTKYDPELRDNTVSEWRLRLLLRLARWDDAYQLTRRLPQDLATTNRWRYWQARSLE
LAQPQNPEAQTLYKNLSRERDFYGFLAADRSQSPYSLNNKPLVLSQALINKVRNTPGVRR
ALEFHARGQIVDGRREWYHVSRHFSRDEMVAQAKLAYDLRWYFPAIRTISQAQYWDDLDI
RFPMAHRDTLVREAKVRGLHSSWVFAITRQESAFMDDARSSVGASGLMQLMPGTAKETAR
KFSIPLASPQQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADH
LSFDVWVESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatttctctgcccggatgtctcatgcgcagtcgcctcttcagtgttttgtcatgtttg
ctgctttccgccgctgccgttcaatccgctcaggcggtggacctgtccacccaacgccag
tattacgatgaagccaagcgcgccctggccaagggcgacagcggcccgtatttccgttac
agccaggctctcgccgattatccgctggagccgtacctcgcctacgacgagctgactgcg
cggctgaaaaccgccagcaacgcggagatcgagaaattcctcgccgagcacggtgacctg
ccgcaggccaactggatgaaattgcgctggctgcgctggctggccgatcgcggcgattgg
gcgacgttcgtcaagtattacgacccgaaactgaatttcactgaacttgactgcctccac
gcgcaataccagatcagccacaacaagaaggccgagggctacgccaacgccgagaagctc
tggctgaccggcaaatcccagcctgccgcctgtgatgcgctgtttggcatgtgggccgcc
gaaggtcagttgaccgaacagaaacgctgggagcgcgccaaactcgccgcccaacaccgc
aactatccgctggccaacagcctggtcaacggcctgaccaccctcgccccgcgcggccgc
ctgctggtggacgtggcgcagaaaccggaactgctcaatcagccttcgcggttcatgccg
gccgatgaaccgatgtcggacgtggtcagcctcggcctgcgccgcctcgcgcgtcaggac
ccggacaaggccatggccctgctcgacggttatgccagcagcatgcatttctcccgcgat
gaaaaagtcgcgatcgcccgggaaatcggcctgaccctcgcccggcgcttcgacagccgc
gcgctggacgtgatgaccaagtacgacccggaactgcgcgacaacaccgtgtccgaatgg
cgcctgcggctgctgctgcgtctggcgcgctgggacgacgcctaccaactgacccgccgt
ctcccgcaggatctggccactaccaaccgctggcgctactggcaggcccgcagcctggaa
ctggcgcaaccgcaaaacccggaagcgcagacgctgtacaagaatctgtcgcgggaacgg
gatttctacggcttcctcgccgccgaccgctcgcaatcgccgtactcgctgaacaacaag
ccgctggtgctcagtcaggcgctgatcaacaaggtgcgcaacaccccgggcgtgcgtcgt
gcgctggagttccacgcccgtgggcagatcgtcgatggccgccgcgagtggtatcacgtc
agccggcatttcagccgcgacgaaatggtcgcccaggcgaaactggcctacgacctgaga
tggtacttcccggccatccgcaccatcagtcaggcgcagtactgggatgatctggacatc
cgtttcccgatggcccaccgcgacactctggtgcgcgaagccaaggtgcgcggcctgcat
tcgagctgggtgttcgccatcacccgtcaggaaagtgcattcatggacgacgcccgttcc
agcgtcggcgccagcggcctgatgcaactgatgcccggcaccgccaaggaaaccgcgcgc
aagttcagcattccgctggcctcgccacagcaggtgctggatccggataaaaacatccag
ctcggcgccgcttacctgagccaggtgcacagccagttcaacggcaaccgcgtgctcgcc
tccgccgcctacaacgccggccccggccgcgtgcgccagtggctgcgtggcgccgaccat
ctgagcttcgacgtgtgggtggaaagcatcccgttcgacgaaacccgccagtacgtgcag
aacgtgctgtcctactcggtgatctacggccagaaactcaattcgccgcaaccgctggtg
gattggcatgagcggtatttcgacgatcagtga
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