Pelosinus fermentans: JBW_00487
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Entry
JBW_00487 CDS
T03813
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pft
Pelosinus fermentans
Pathway
pft03030
DNA replication
pft03430
Mismatch repair
pft03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JBW_00487
03430 Mismatch repair
JBW_00487
03440 Homologous recombination
JBW_00487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pft03032
]
JBW_00487
03400 DNA repair and recombination proteins [BR:
pft03400
]
JBW_00487
Enzymes [BR:
pft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JBW_00487
DNA replication proteins [BR:
pft03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JBW_00487
DNA repair and recombination proteins [BR:
pft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JBW_00487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
GntR
RuvB_N
Sigma54_activat
Mg_chelatase
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AJQ25839
UniProt:
I8TRE2
LinkDB
All DBs
Position
631528..632517
Genome browser
AA seq
329 aa
AA seq
DB search
MKWTDIIGHKDQVTMLRHMESSRRMPHAVLFAGPKGIGKNLVANVVAASLLCSDQEERPC
GRCHSCQQISYGSHPDFLHIAPDGTNIKIEQIRMLQQELSMASFSGQRRVCIIDGAELMT
TQAANSLLKVLEDPPGEIVFLLLAANKQMLLTTIISRCMVIAFQPLADELLAQDLMAKGY
LPETSEVAARLSSGRMGIALALLEPEGLALRNQALEMILKLMDSKLEAVWHSAGVLEKME
RNDILEFIKYVTYILRDILLLVTGQGKQWLFNIDVAEELCEVADMWSERRLVTAIRAVET
ARRALLANANTRLTSEALLIRIYDLAREV
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggaccgatatcattgggcataaagatcaggtaaccatgctgcgtcatatggag
agcagcagacgcatgcctcatgctgttttatttgcgggacctaaaggcattggtaaaaac
ctggtggcgaatgtcgttgccgcatctttattatgcagcgatcaagaagagcgcccttgt
ggtcgttgccattcttgtcagcaaatatcctatggcagtcatcctgattttctccacatt
gcccctgatgggaccaatattaagattgaacaaattcgaatgttgcagcaggaattgtca
atggcatcttttagtggacagcgtcgcgtctgcatcattgatggtgctgagctcatgacg
actcaagctgccaatagtttgctaaaagttctagaagaccctcctggagaaattgttttt
cttttattagcagcgaataaacaaatgctgcttactacgattatatctcgatgcatggtg
attgcttttcagcctttagcagacgagctattggctcaggatttaatggctaaaggttat
ttgccagaaacatcggaagtagcagcccgcttaagcagcggtcgaatgggaattgctctt
gctcttttggaacctgaaggtcttgccctgcgtaatcaggctctggagatgatcctaaaa
ctaatggactccaaactggaagcggtctggcactcagctggagtattggaaaaaatggaa
cgtaatgatattttggaatttataaagtatgtaacttatatcttgcgtgatatactattg
cttgttactggacagggtaagcaatggttatttaatatagatgttgcagaagaattgtgt
gaagtagcggacatgtggagtgaaagacggctagtaacagccattagggcagtggagaca
gctagacgggctctgctggccaatgcaaatacaaggcttacgagtgaagcgttattgata
agaatatatgacttagcaagggaggtttga
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