Pseudomonas fulva: Psefu_2291
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Entry
Psefu_2291 CDS
T01501
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfv
Pseudomonas fulva
Brite
KEGG Orthology (KO) [BR:
pfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfv03032
]
Psefu_2291
03400 DNA repair and recombination proteins [BR:
pfv03400
]
Psefu_2291
Enzymes [BR:
pfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Psefu_2291
DNA replication proteins [BR:
pfv03032
]
Prokaryotic type
DNA Topoisomerases
Psefu_2291
DNA repair and recombination proteins [BR:
pfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Psefu_2291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Acetyltransf_5
MBD
Motif
Other DBs
NCBI-ProteinID:
AEF22258
UniProt:
F6AC76
LinkDB
All DBs
Position
complement(2459454..2460479)
Genome browser
AA seq
341 aa
AA seq
DB search
MTNLSAAPELPNDLHYVDDRTPGITRRKLRGKFCYFEPNGERIRDAQEIARINALAIPPA
YADVWICPDPKGHLQATGRDARGRKQYRYHPRWREVRDTDKYANLLMFGKALPKLRQTVE
EHLLLPDHGREKVMATVITLLDNTLIRIGNVRYAKENRSYGLTTLRNRHVEVQGSAIRFH
FRGKSGIEHEVEVSDRRLARIIRRCLELPGQHLFQYLDADGERHTVTSTDVNNYLRELTG
ADFTAKDYRTWAGSALALTLLRELEWQPESSAKKHVVNMVKQVAEELRNTPAVCRKCYIH
PALIEAFHAGALADLRLAAARKGLRSEESLLMRFLEKLPTA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctgtcggcagcaccggaactgcccaacgacctgcattacgtggacgaccgc
acgcccggtatcacccgccgcaagctacgcggcaagttctgctatttcgagcccaatggc
gaacgcatccgcgacgcccaggagatcgcccgcatcaacgccctggccataccaccggcc
tatgcagatgtgtggatctgtccagacccaaagggccacctgcaggccaccggtcgggac
gcccgcgggcgcaagcagtaccgctatcatccgcgctggcgtgaagtgcgtgataccgac
aagtacgccaacctgctgatgttcggcaaggccctgccgaaactgcgccagaccgtggaa
gagcacctgctgctgcccgatcatggccgcgagaaagtcatggccacggtgatcaccctg
ctcgacaacacgctgattcgtatcggcaacgtgcgctacgccaaggagaatcgctcctat
gggctgaccaccctgcgcaaccgccatgtcgaggtccagggcagcgccattcgctttcac
tttcgcggcaagagcggcatcgagcacgaagtggaggtcagcgaccgccgcctggctcgc
atcatccgccgctgcctggagctgccaggccagcatctgttccagtacctggatgccgac
ggcgaacgtcacaccgtgacctcaacggacgtgaacaactacctgcgcgaactcaccggc
gccgacttcaccgccaaggattaccgcacctgggccggcagtgccctggcgctgacattg
ctgcgggagctggaatggcagccggagagctcggccaagaagcacgtagtgaacatggtc
aagcaggttgccgaagagctgcgcaatacgcccgcggtgtgccgcaagtgctatatccat
ccggcactgatcgaagccttccatgccggcgctctggctgatctgcgcctggcggctgca
cgcaaaggcctgcgtagcgaagaaagcctgctgatgcgctttctggagaaactacccacc
gcctga
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