Pseudomonas simiae PCL1751: PF1751_v1c24540
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Entry
PF1751_v1c24540 CDS
T03766
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pfw
Pseudomonas simiae PCL1751
Pathway
pfw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pfw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PF1751_v1c24540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfw03021
]
PF1751_v1c24540
Transcription machinery [BR:
pfw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PF1751_v1c24540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
GerE
HTH_11
HTH_28
HTH_7
HTH_38
DUF6362
HTH_24
DUF2285
HTH_Tnp_ISL3
HTH_Tnp_4
Xre-like-HTH
HTH_29
Tau95
Phage_terminase
TnsD
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AJP52154
LinkDB
All DBs
Position
2757521..2758039
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AA seq
172 aa
AA seq
DB search
MNDVVVPTHAPELTLSSLYRDHRSWLESWLRRRLGNAWDAADLSQDTFLRVLASAQPIAQ
MQEPRAYLVTVGKRLLVNFHQRRSLEQAYLNALASLPEACVPSPEQRWLLLETLQALDEL
LDGLPVLVRRAFLWSQLEGLGYRDIAERLDVSERTVKRYMAQAYEHCLLVDL
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgttgtagttccgacccacgcccccgaactgaccttgtcgagcctgtaccgc
gaccaccgcagctggctggaaagctggctgcgccggcgtctgggcaatgcctgggatgcg
gctgacctgagccaggataccttcttgcgtgtgctggccagcgctcagccgatcgcgcag
atgcaggagccgcgggcctatctggtgacggtcggcaagcgcctgctggtgaatttccat
cagcggcgcagtcttgaacaggcttatctgaatgccttggccagcctgccggaagcctgc
gtgccgtcgcccgaacaacgctggctgctgctggaaaccttgcaagccctggatgaattg
ctcgatggcttgccggtgctggtccgccgtgcgttcctgtggagccaactggaaggcctg
ggctatcgggacatcgccgagcgcctggacgtgtcggagcgcacggtaaaacgctatatg
gcccaggcttacgaacattgcctgctggtggacctgtga
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integrated database retrieval system