Phaeobacter inhibens DSM 17395: PGA1_c36460
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Entry
PGA1_c36460 CDS
T02192
Name
(GenBank) putative lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
PGA1_c36460
Enzymes [BR:
pga01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PGA1_c36460
Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PGA1_c36460
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFO93277
UniProt:
A0AA85ZEP4
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All DBs
Position
3815297..3816691
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AA seq
464 aa
AA seq
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MQYDLGARRHIALTAAMLAALAATDARVAASPLPTADGPLVEIAASQPPQVSLRPTARPV
APSGVAATPLRPRIRPEQQAPAPAEPGVSPAKQRAFEGWIAAFRPRARAEGLSQATLDRA
LSGVEFDPKIVQRDGNQSEFVTPIWTYLERAVSDARIQNGKAALRDHAQTLARIEAKYGV
DREVVAAVWGMESNYGTFRGERDIIRSLATLAFDGRRGAFFESQLIAALQILQAGDVTPE
AMTGSWAGAMGHTQFMPTSYLAYAVDFTGDGKRDIWSDDPADALASTAAYLKRFGWVKDQ
PWGLEVRLPTGFNYALADRKIIKSAQAWRQLGVTSADGGSLPDHGKGALLLPAGAQGAAF
IVYRNFAVIERYNAADAYVIGVGHLSDRLRGTGPIRASWPQDSRPLTYKERRELQQRLTG
AGYGTGGADGRIGPKTRAALRAYQLAMGLTPDGYPSLSVLNRLR
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatcttggcgcccggaggcacatagccctgacagcagcgatgcttgcggcc
ctggcagcgaccgatgcccgcgttgcggccagccccttgcccacagccgatggaccgctt
gtagagattgcagcatcccaaccgccgcaggtgtccttgcgcccaacggcccgcccggtg
gcgccatcgggcgtggcagctaccccgttgcggccgcggatacgcccggagcaacaggct
cctgcacctgcggagcccggcgtctccccagccaagcaacgcgcctttgagggctggata
gcagcgttccgcccgcgcgcacgggccgaaggtctgtcgcaggccactctggaccgggcg
ctctctggtgtggaattcgatccgaagatcgtgcagcgtgatggcaatcaatcagagttt
gtaaccccgatctggacttatcttgagcgtgcggtgtccgacgcgcgcattcagaacggg
aaggctgccctgcgcgaccacgcgcaaacattggcccgcatcgaagccaaatatggcgtc
gacagagaggttgttgctgccgtctggggcatggagagcaactacggtaccttccggggg
gagcgcgatatcattcgatcgctggcgacactggcctttgacgggcggcgcggtgcgttt
ttcgaaagccagctgattgccgccttacagatccttcaggcgggtgatgtgacgccggag
gcaatgaccggcagctgggccggggcaatggggcacacgcaattcatgccgacttcctac
ttggcctatgcggtggacttcaccggggatggcaaacgcgatatctggtccgatgatcct
gctgatgcgctcgcgtcaaccgccgcctatctgaaacgtttcggctgggtgaaagaccaa
ccctgggggctggaggtgcgcctgccaacagggttcaactatgcgctggcggatcgcaaa
atcatcaaatctgcacaggcctggcggcagctgggggtgaccagcgccgatggcggatcc
ctgccggatcacggaaagggcgcattgctgctgcctgccggtgcgcagggggctgccttc
atcgtctatagaaacttcgccgtgattgagcggtataatgcggcggatgcctatgtgatt
ggtgtggggcacctgagcgaccggttgcgtggcacgggaccgatccgcgccagctggccg
caggacagccgtcccctgacgtataaggaacggcgcgagctgcagcagcggctgaccgga
gcgggctatggtactggcggagcggacgggcggattggaccgaagacccgtgccgccctg
cgcgcttatcagctggccatggggctgaccccggacggctacccgtcactctcggtgctc
aaccgcctgcgctga
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