Photobacterium gaetbulicola: H744_2c1159
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Entry
H744_2c1159 CDS
T03698
Name
(GenBank) putative 16S rRNA uridine-516 pseudouridylate synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
pgb
Photobacterium gaetbulicola
Brite
KEGG Orthology (KO) [BR:
pgb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgb03009
]
H744_2c1159
Enzymes [BR:
pgb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
H744_2c1159
Ribosome biogenesis [BR:
pgb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H744_2c1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AJR07838
UniProt:
A0A0C5WKZ4
LinkDB
All DBs
Position
2:1200125..1201279
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AA seq
384 aa
AA seq
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MSQNQPTKGAANGVQSQAVRLNKFISDTGYCSRREADKLIDQGRVTINGQQPEMGVKVMP
GDEVLVDDKPLRAKEQPIYIALNKPAGITCTTERHVKDNIVDFIGHRKRIFPIGRLDKPS
DGLIFLTNDGDIVNKILRAGNSHEKEYVVRVDKPITQEFIDKMASGVEILDTVTLPCKVT
KETNYSFRIVLTQGLNRQIRRMCEALGYDVFKLRRVRIMNISIDGLPNGKWRYLTEAEIA
EIHSLIADSSKTEEASKVDGEGKNIKKATDAKLFDSRQQAKQDGDGKIKYKTYKGKGEPN
RRRGGERSERDDRAAHGRGQGRGQGRGQGQGQGQGQGRQDERRSPRPGRGVQPGHRRTQR
DEEAPRSHSGGSSRILKWKSPKSE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaatcagcctaccaagggtgctgcaaacggcgttcagagccaggcagtacga
cttaacaaatttatcagtgatacaggctattgctcacgccgtgaggcggacaagcttatt
gatcaaggaagggtgaccatcaatggtcagcagcccgagatgggcgtcaaagtcatgccg
ggtgatgaagtgctggtcgatgataagccgcttcgtgccaaagagcagccgatttatatc
gcgctgaacaagccggccggtattacctgtaccaccgagcgccatgtcaaagacaacatt
gttgatttcattggccaccgtaagcgtattttcccgattggccgcttggataagccttct
gatggtttgattttcctgaccaacgatggcgatatcgtcaacaagatcctgcgagccggt
aactcgcacgagaaagagtatgtggtgcgggtcgacaaaccaattacccaggagtttatc
gacaagatggcgtcaggggttgagatccttgataccgtgaccttgccttgtaaggtgacc
aaggaaaccaactactcattccgtatcgtgttaacccaaggtctgaaccgccagatccgc
cgtatgtgtgaagcgctgggctacgatgtcttcaagctgcgacgggttcgtatcatgaat
atcagtatcgatgggctgccaaacggcaagtggcgttacctgaccgaggccgaaattgcc
gagatccacagcctgattgcggactcgagcaaaaccgaagaagcctccaaggttgacggt
gaaggcaagaacatcaagaaagcaacggatgccaagctgtttgatagccgccagcaagcc
aagcaagatggtgacggcaagatcaaatacaagacctacaaaggcaagggcgaaccgaat
cgccgccgtggtggcgagcgcagtgagcgtgatgaccgtgccgcgcacggtagagggcaa
ggtcgcggccaaggccgtgggcaggggcaaggtcaggggcaaggtcagggccgtcaggac
gagcgcagaagtccgcgcccgggccgcggcgttcagccgggtcaccgtcgcactcagcgt
gatgaagaagcgccgcgctcacacagtggtggttcaagccggatcctgaagtggaaatca
ccaaaatctgaataa
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