Pseudomyrmex gracilis (graceful twig ant): 109854106
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Entry
109854106 CDS
T05003
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pgc
Pseudomyrmex gracilis (graceful twig ant)
Pathway
pgc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109854106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgc03021
]
109854106
03036 Chromosome and associated proteins [BR:
pgc03036
]
109854106
Transcription machinery [BR:
pgc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109854106
Coactivators
SAGA/TFTC/STAGA complex
109854106
Chromosome and associated proteins [BR:
pgc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
109854106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
SAGA-Tad1
TAF
Motif
Other DBs
NCBI-GeneID:
109854106
NCBI-ProteinID:
XP_020282477
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MASAKFLEEALSTDVDESAVNAIVGSLETQLVTSTPTVAGHQVSSASVGQQNHQVNSAIS
NGGTIAAVQPQKHGVSNGGGATTVNSLMTQEVTKSITTSTLLPVNVVTSNTVVPVTQVIT
TQQQQQLQQQHTQPPGISPATYINQVTTHQVSNNQTTNISSLTKTQEPVKIIYPTVGQVI
ATTGVANANNKISFPTQTVSQLANGTLGITSQAVLQTTSNVVTNVGSVSQTGSQTVTTVN
KPTALVIKTSVAPGGMVSVPMTVPVSIAGNAVSTALQAKAGVTSALVPSNVQILNVNTMR
PATPVAGQQANKQVTSRVVIGQHQLVQARPGTPGITLQALHSLQPGTQGHLLLKTENGQF
QLLRVGPAPTAGTPAGTAVTPNSITGNAVVAAAPTPGTTYRIASVPAVSRLNTQFTGPPL
ATLRKSVQTVTVAPTITTPTTTVGTATTTPTTSTTSTATTAQTVQTPAPRQTTDNTKEKC
RKFLANLLDLSSREPKAVERNVRTLIQELIDTKVDPEEFCDRLEKLLNASPQPCLIGFLK
KSLPLLRQALVTKELVIDGIKPPPANVVFSIASAVVPTATQQIQYRPAVAVTATVPVTVT
TATTQVRVMTPLPTVATAVTAAVTVVTTTVPRPAQPVQQRLVRPITTVVRSPSTTYAVKT
SPVALTGIRPTAPVVQKAPTVATTVVKTVTTITQGKTVSTTTTVNKAAVPSLVQKPTPKE
KEKKTFSSAGYTADDDINDVAAMGGVNLAEESQRILGSTEFVGTQIRSCKDEVFLHMTSL
QQKIKQIASSHGLEEPNQEVSALISHAVQERLKNLVEKLAVIAEHRIDFIKVDPRYEVTQ
DVKAQLKFLEDLDRVERKRHEEQERELLLRAAKSRAKTEDPEQAKLKAKAKEMQRAEMEE
LRQREANLTALQAIGPRKKPKLDTAGSTSSGSTSGANASTSGLNRQMPMRPRVKRVNYRD
LLFLFEQEKDTCRSTTLYKSYLK
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctaagtttctggaggaagctctgagcacggatgtcgacgaatccgcagtg
aacgcgatagtaggctctctggagacacagctcgtaacgtccacgccaaccgtggcaggc
catcaagtgagttccgcgtcggtcggccagcagaatcatcaggtgaatagcgctatatcc
aacgggggcaccatcgccgcggtgcaaccgcagaaacatggggtttcgaacggcggcggt
gcgactactgtgaacagtctgatgactcaggaggtcaccaagtctattaccaccagcact
ctgctaccagtaaatgtggttacttcaaatacagtggtgccagtgacacaggttattacc
acacaacagcagcaacaactgcagcaacaacatacacaaccgccaggaatatctcctgct
acctatatcaatcaagtgaccactcatcaggtgtctaataatcaaactacaaatatatca
agtttaacaaagacacaggagccagtgaagattatctatcctacagttgggcaagttata
gctactactggagtagcaaatgccaataacaaaatttcttttcccactcagactgttagt
cagttggcaaatggtaccttaggtataacttcacaggctgtgctgcagactacgtcaaat
gttgttaccaatgttggttctgtcagtcaaacaggcagtcaaacagtgactacggtgaac
aaaccgacagctctagtgatcaagaccagtgtagcaccaggtgggatggtttctgttcca
atgacagttccagtttctatagctggaaatgcagtcagtacagctttacaagccaaagct
ggagttacttctgcattagtacccagtaatgttcaaattctcaatgtaaatacaatgcgt
ccagccacaccagtggcaggacagcaagctaataaacaagttacatcgagagttgtaatt
ggacaacatcaattggtccaagcaagaccaggaactccagggataacgttacaggcactt
cacagtcttcaacctggtactcaaggtcacctattgttaaaaaccgaaaatggccaattt
cagttgctcagagttggtccagctcctactgcgggtactcctgctggtactgcagttact
ccaaatagtataactggaaacgcagttgttgctgctgctccaactccaggcacaacttat
cgcatagcttcagtaccagccgtaagtaggctgaatactcagttcactggcccaccactc
gccactctaagaaaatctgttcagactgttaccgttgctcctacaatcactacacctact
acgactgtaggaacagcgactacaacaccaacaactagcactacgtcaacagctactact
gctcaaacggttcaaacacctgcaccacgtcaaactactgataataccaaagaaaagtgc
cgtaaattcttagcgaatttattagatttatctagtcgagaacctaaagcagtggaacgc
aatgttcggactttgatacaagagctgattgatactaaggtcgatccggaagagttttgt
gacaggctcgaaaaattattaaacgcttcaccacaaccatgtcttatcggatttttgaag
aagagtttgccacttttacggcaagctcttgttacgaaggaattagttatagatggaata
aagcctcctccagccaatgttgttttctccatagcttcggcagttgtcccaactgctaca
cagcaaattcaatacagacctgcagttgcggtaacagcaacagttcctgtgactgtaaca
acagcaacaactcaagtgagagtgatgacaccacttccgacagtggctacagcagtgacg
gcggcagtgactgttgttacaacaaccgttccacggcctgctcaacctgttcaacagaga
ctggttcgacccattacgaccgtggttcgtagcccttctacaacgtatgctgtgaaaacg
tctcccgttgcattgactggaattcgtcccactgctcctgttgttcaaaaagcacccaca
gttgcaacaacagttgttaaaacagttacgactattacacaaggcaaaacagttagtaca
accactactgttaataaagccgcagtgccttctcttgtccagaaaccgactccaaaggag
aaagagaaaaagacattttcgtcagcaggatatactgcggacgatgacataaacgatgta
gcagctatgggtggtgttaatcttgcagaagaatctcaaagaattcttggttccaccgaa
tttgtcggtactcaaatacgatcctgtaaagacgaagtatttttgcatatgacatcatta
caacagaaaattaaacaaattgcatctagccatggactggaggaacccaatcaagaagtt
tcagctttaatttcacatgctgttcaagagaggttaaagaatttagtagaaaaattagcg
gtcattgcagaacataggatagattttatcaaagttgatcctagatacgaagtaacacaa
gatgtaaaagcacaattaaagtttctagaagatctagatagagtcgaacgtaaacggcac
gaagagcaagaacgagaattgcttttacgcgcagcaaaaagtcgtgcgaaaacagaagat
cctgaacaagccaaattaaaggctaaggccaaagagatgcaacgtgcagagatggaagaa
ttaagacaaagggaagcgaatctaacagctttgcaagcaatcggtcctcgcaaaaagcct
aaactcgacacagcgggatcgactagctcgggaagcacgtctggtgcaaacgcgtcgaca
agcggattaaacagacaaatgccgatgagaccacgtgtaaagagagtgaattatagggat
ttattgtttttgtttgaacaggagaaagacacgtgtagaagtacaacgctgtataaatcc
tacttgaagtga
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integrated database retrieval system
