Phaeobacter gallaeciensis DSM 26640: Gal_00804
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Entry
Gal_00804 CDS
T02968
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pgd
Phaeobacter gallaeciensis DSM 26640
Pathway
pgd00550
Peptidoglycan biosynthesis
pgd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gal_00804
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgd01002
]
Gal_00804
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgd01011
]
Gal_00804
Enzymes [BR:
pgd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Gal_00804
Peptidases and inhibitors [BR:
pgd01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Gal_00804
Peptidoglycan biosynthesis and degradation proteins [BR:
pgd01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Gal_00804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
DUF5110
Motif
Other DBs
NCBI-ProteinID:
AHD08586
UniProt:
V9WC29
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All DBs
Position
811801..813285
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AA seq
494 aa
AA seq
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MISRRFFLTSCLSSVAANTALANAPAVSLRPVARDPASLISAGGGLKGLLSRAGLSGEVA
CAVADVKTGLRLEAEGAGAGLPPASVAKALTALYALDALGADHRFTTQIVATGGISGGVV
SGDLVLVGGGDPMLNTDTLAQLAKALKTAGIREVRGAFRVWEGALPQIKTIDPGQPDHVG
YSPAISGLALNYNRVHFEWKRAGQGWAVTMDARTKKYRPEVSVATMKIAQRSLPVYSYSE
GKDTDRWTVASKALGKGGARWLPVRHPGAYAADVFRTMARANGIKLSAPKVAKSRPSGQV
VAHHNSPPLDLMLKATLKYSNNLMAEMIGLAATQARGGRPRSLRDSAAQMSRWAAETYGM
ANTRLVDHSGLGEDSRVTPDDMVSALVASYRDGRLKPLLKSFPMRDSKGRVLKGHPIKVA
AKTGTLNFVSGLGGFMTATDGTVLAFAIFSADQKARSRISRAERERPQGARTWNRRAKQV
QQKLIERWGRVYGS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcgacgtttttttctgacctcctgcctttcctctgtggcggcgaacactgcg
ctggccaatgcgcctgcggtctctctgcgtccggtggcgcgcgatccggccagtctgatc
agcgcaggtggcgggctgaaggggctgttgtcccgcgcgggcctctcgggtgaggttgcc
tgcgcggtggccgatgtgaaaaccggtctgcggctggaagccgaaggggcaggagcgggt
ttgccgcccgccagtgtcgccaaggcgctgaccgcgctttacgcgctggatgcgctgggg
gcagaccatcgctttaccacgcagattgtcgcaactggcggcatcagcggcggcgtggtc
tccggcgatctggtgctggtgggcggtggtgatccgatgctcaataccgacactctggca
caactggccaaggcgctcaaaactgcgggcattcgcgaggtgcgcggcgccttccgcgtc
tgggagggcgcgctgccgcagatcaagacgattgatccgggtcagcctgatcacgtgggg
tacagtccggcgatttcagggctagcgctcaattacaaccgggtgcatttcgaatggaaa
cgtgcaggccagggctgggccgtcaccatggatgctcgcaccaagaaatatcgccccgaa
gtctctgttgcgacgatgaaaatcgcgcagcgcagcctgccagtttacagctattccgaa
ggcaaggataccgaccgctggacggtcgccagcaaggcgctgggcaaagggggtgcgcgt
tggctgccagtacgccatcccggagcctatgcagcggatgtcttccgcaccatggcgcgt
gccaatggcatcaaactgtcagcgccaaaggtcgcgaaatcgcgcccctcggggcaggtg
gtggcccatcacaacagcccgccgctggatctgatgctgaaggcgacgctgaagtattcc
aacaatctgatggccgaaatgattggtctggcggccacgcaggcgcgcggcggacggccc
cgtagcctgcgcgactctgccgcgcagatgagccgctgggcggcggagacctatggcatg
gccaacacccggctggttgatcactccggccttggcgaggattcgcgagtgacccccgat
gatatggtcagcgcgctggtggcctcctatcgggatgggcggctgaaacctctgctgaaa
tcctttcccatgcgcgacagcaagggccgcgtcctgaagggccatccgatcaaggtcgct
gccaaaaccggtacgctcaacttcgtgtccggtctcggcgggttcatgacggccaccgat
ggcactgtgctcgcctttgccattttcagtgccgatcagaaggcgcgctcccgcatatca
cgggcggaacgcgaacgcccgcagggggcaagaacctggaaccgccgcgccaagcaggtg
cagcaaaagctgattgagcgctggggacgggtttacggcagctga
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