Pseudomonas germanica: J0G10_09640
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Entry
J0G10_09640 CDS
T08191
Name
(GenBank) PAS-domain containing protein
Organism
pgf
Pseudomonas germanica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
HATPase_c_2
SSF
PAS_8
PAS
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
QYY83700
LinkDB
All DBs
Position
complement(2168526..2171996)
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AA seq
1156 aa
AA seq
DB search
MSLSTGLIAAVALAYMAIMFAIAFYGDRRSAPLPPRVRAWVYSLSLAVYCTSWTFFGAVG
QAAEQLWSFLPIYLGPILLLVGAPWVLQKMVMISKQENITSIADFIAARYGKSQSLAVVV
ALICLVGVLPYIALQLKGIVLGVNLLIGAGADAMGTRAQDTALIVSLVLALFTIVFGTRN
LDATEHHRGMVLAIAFESLVKLFAFLAVGAFVTYGLYDGFDDLFNQAMLAPRLEEYWKET
INWPSMVVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLALAALFVVPIAL
AGQMLLPRDVLPDSFVISLPLAQAHPALAMLAFIGGASAATGMVIVASVALSTMVSNDML
LPWLLRRNNAERPFEVFRQWMLSVRRVSIVVILLLAYVSYRLLGSTASLATIGQIAFAAV
TQLAPAMLGALYWKQANRRGVFAGLAAGTFLWFYTLILPIAAHSLGWSLSSFPGLAWLHS
NPLNLPITPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQEISARPSARSML
AVQIDDLLQLAARFVGEERARQSFIRFAYRQGKGFNPNQNADGEWIAHTERLLAGVLGAS
STRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLKLVA
WNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSE
RLFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQALTEANEGLEQRVSERTQELSQLN
VALTEAKGTAEAANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQDDGLSSEAQKLVQHL
DSSLRSAEDLISDLLDISRLENGKINPDRKAFAVNELFDTLGAEFKALAQEQGLKFRVRG
SHLRIDSDIKLLRRILQNFLTNAFRYAKGPVLLGVRRRGGELCLEVWDRGPGIPEDKQQV
IFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHTLRVRSWPGRGSVFSVSVPLARSQA
QPASAAAEMNGRLPSGARVLCIDNEDSILIGMNSLLSRWGCQVWTARNREECAALLNDGV
RPQLALVDYHLDHGDTGTELMAWLRTSLGEPVPGVVISADGRPEMVAQVHAAGLDYLPKP
VKPAALRALLSRYLPL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtccaccgggctgatcgccgccgtcgccctggcctatatggccatcatgttc
gccatcgccttctacggcgaccgccgcagcgcgccgttgccgccgcgcgtgcgtgcctgg
gtgtacagcctgtcgctggcggtttattgcaccagctggacgttcttcggcgctgtcggt
caagccgccgagcaattgtggtcattcctgccgatttacctcggaccgattctgctgttg
gtcggcgcgccgtgggtcctgcagaaaatggtgatgatcagcaaacaggagaacatcacc
tccatcgctgactttatcgccgcgcgctacggcaaatcgcaatcgctggcggtggtcgtg
gcgctgatctgtctggtcggcgtcctcccctacatcgccctgcaactcaaaggcatcgtc
ctcggcgtgaacctgctgatcggcgccggtgccgacgccatgggcactcgcgcccaggac
accgcgctgatcgtgtcgctggtgctggcgctgttcaccatcgtcttcggcacgcgcaac
ctcgatgccaccgaacaccaccgtggcatggtgctggcgattgctttcgaatcgctggtc
aaactgttcgcctttctcgccgtcggcgctttcgtcacttatggcctgtatgacggtttc
gatgacctgttcaaccaggccatgctcgccccgcgtctcgaggaatactggaaagaaacc
atcaactggccgtcgatggtggtgcagaccggcgtggcaatgatggcgatcatctgcctg
ccccggcagttccacgtcaccgtggttgagaacatcgacccgcaagatctgcgcctggcc
aaatgggtatttccggcctatctggccttggccgcgctgtttgtcgtgccgatcgcgctc
gctggtcagatgctgttgccacgcgatgtgctgcccgactccttcgtgatcagcctgcca
ctggcgcaggcccatccggcgctggccatgctggcgtttatcggtggcgcgtcggcggcg
accggcatggtgattgtcgccagtgtggcgttgtcgaccatggtctccaacgacatgctg
ttgccgtggctgctgcggcgcaataacgccgagcgcccgttcgaagtgttccgccaatgg
atgctctcggtacgccgcgtcagcatcgtcgtgattctgttgctggcctacgtcagctat
cgcttgctcggctcgaccgcaagcctggcgaccatcggccagatcgcgttcgccgccgtg
actcaactggcgcccgccatgctcggtgcgctgtactggaaacaggccaaccggcgcggc
gttttcgccggtttggccgccggtactttcctgtggttctacaccttgatcctgccgatc
gccgcgcacagccttggctggtcgttaagcagttttccagggctggcgtggttgcacagc
aatccgctgaacctgccgattaccccgctgacccaaggcgtagtgctgtcgctggccggc
aacttcactctgttcgcctgggtttcggtgctgtcgcgtacccgcgtatcggaacactgg
caggccggacgtttcatcggtcaggagatcagtgcgcggccgagcgcacgctcgatgctg
gcggtgcaaatcgacgacttgctgcaattggccgcgcgttttgtcggtgaggaacgtgcg
cgccagagcttcattcgcttcgcctatcgccagggcaaaggcttcaaccccaaccagaat
gccgacggcgagtggatcgcccataccgagcgcttgctggccggtgtactcggcgcttcg
tcgacgcgcgcagtggtaaaagccgccatcgaaggtcgggaaatgcagttggaggacgtc
gtgcgcatcgccgacgaagcctccgaggtgctgcagttcaaccgtgccttgctgcagggt
gcgatcgagaacatcacgcaaggcatcagcgtggtcgaccagtcactgaaactggtggcc
tggaaccgtcgttatctggagctgttcaactaccccgacggcttgatcagcgtcggtcgg
ccgattgccgacatcattcgctacaacgccgagcgcggcctgtgcggccccggcgaagcg
gaagtccacgttgcccgccgcttgcactggatgcgtcagggccgcgcgcacacctctgaa
cggctgttccccaacggccgggtgatcgagctgatcggcaacccgatgccggggggcggt
ttcgtcatgagtttcaccgacatcaccgcgttccgcgaagccgagcaggcactgaccgaa
gccaatgaagggctggaacaacgggtcagcgaacgcacccaggagctgtcgcaactcaat
gtcgcgctgactgaagccaaaggcaccgccgaagccgccaaccagtcgaaaacccgcttt
ctcgcggcggtcagccatgacttgatgcaaccgctgaacgccgctcggctgttctccgcc
gccctctcccatcaggacgacggcttgagcagcgaggcgcagaaactggtgcagcacctc
gacagctcactgcgttcggccgaggacctgatcagcgatctgctggatatttctcgtctg
gaaaacggcaagatcaacccggaccgcaaggcgtttgcggtcaatgaactgtttgacacg
ctcggcgcggaattcaaggcactggcgcaggaacagggtttgaagttccgggtgcgcggc
agccatctgcgtatcgacagcgacatcaaattgctgcggcgcattttgcagaacttcctg
actaacgctttccgctacgccaaaggcccggtgctgctgggcgtgcggcggcgcggcggc
gaattgtgtctggaggtgtgggatcgcgggccagggatcccggaagataaacagcaagtg
attttcgaagagttcaaacgcctcgacagtcatcagacccgcgctgaaaaaggcctcggc
ctgggtttggcaatcgccgatggtttgtgccgggtactcggtcacaccttgcgggtgcgc
tcgtggccgggtcgcggcagtgtgttcagcgtcagcgtgccgcttgcccgctcgcaggcc
caaccggcaagcgctgcagccgaaatgaatggcaggttgccaagcggcgcgcgggtgcta
tgcatcgacaatgaagacagcattctgatcggcatgaacagcctgctcagtcgctggggc
tgtcaggtgtggacagcgcgcaatcgcgaagaatgtgctgcgctgttaaatgacggcgtg
cggccgcaactggcgttggtcgactatcacctcgaccacggcgataccggcactgagctg
atggcgtggttgcgcacgagcctgggtgagccggtgccgggggtagtgatcagcgctgac
gggcgaccggagatggtcgcccaggtgcatgcggcggggctggattatctgcccaaaccg
gtgaagccggcggcgttgcgggcgttgttgagtcggtacttgccgctatag
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