Pseudomonas germanica: J0G10_20855
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Entry
J0G10_20855 CDS
T08191
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pgf
Pseudomonas germanica
Pathway
pgf00071
Fatty acid degradation
pgf00280
Valine, leucine and isoleucine degradation
pgf00310
Lysine degradation
pgf00362
Benzoate degradation
pgf00380
Tryptophan metabolism
pgf00410
beta-Alanine metabolism
pgf00640
Propanoate metabolism
pgf00650
Butanoate metabolism
pgf00907
Pinene, camphor and geraniol degradation
pgf00930
Caprolactam degradation
pgf01100
Metabolic pathways
pgf01110
Biosynthesis of secondary metabolites
pgf01120
Microbial metabolism in diverse environments
pgf01200
Carbon metabolism
pgf01212
Fatty acid metabolism
Module
pgf_M00087
beta-Oxidation
pgf_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pgf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
J0G10_20855 (fadB)
00650 Butanoate metabolism
J0G10_20855 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
J0G10_20855 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
J0G10_20855 (fadB)
00310 Lysine degradation
J0G10_20855 (fadB)
00380 Tryptophan metabolism
J0G10_20855 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
J0G10_20855 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
J0G10_20855 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
J0G10_20855 (fadB)
00930 Caprolactam degradation
J0G10_20855 (fadB)
Enzymes [BR:
pgf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
J0G10_20855 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
J0G10_20855 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
J0G10_20855 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
J0G10_20855 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QYY80176
LinkDB
All DBs
Position
complement(4729722..4731869)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVVAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAIEWIASGKENRPEDAL
KVSAVDAVVAPEKLQEAALELIKRAISGEFDFKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEGQVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgataacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgtcccaaccgtagtggccatcaatggcatcgccctgggtggtggtctggaa
atgtgcctggcggctgactatcgcgtcatgtcgaccaaagccaagatcggcctgccggaa
gtcaagctgggcatctacccaggcttcggtggcaccgtgcgtctgccgcgcttgatcggt
gtcgataacgccatcgagtggattgcctccggtaaggaaaaccgccctgaagacgccctg
aaagtcagtgccgtcgacgccgtggttgctcctgaaaaactgcaggaagctgcccttgaa
ctgatcaagcgcgccatctccggcgagttcgatttcaaggccaagcgtcagccgaaactt
gaaaaactcaagctgaacgctattgaacagatgatggctttcgaaaccgccaaaggtttc
gtcgccggtcaggctggcccgaactacccagcgccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagccgccggcttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggagctg
aagaaaaaggccaaggcctacgacgaaatcgccaaagacgtgaagcaggccgctgtactc
ggcgccggcatcatgggtggcggtatcgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcagggtctggccgaagccgccaagctg
ctggttggccgcgttgataaaggtcgcatgaccgctgcgaaaatggctgaagtgctcaat
ggcattcgtccgaccctgtcctacggcgacttcggtcacgtggatctggttgtcgaagct
gtcgtcgagaaccctaaggtcaagcaagccgtactggctgaagtcgaaggtcaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggctgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggtggtttcgccaagctggtcagcgccggtgtcgac
ttcgtccgtatcgacaaggtcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccatggtcgtgacgtgatggctgaaggtttc
ccggatcgcatgaaggatgaccgtcgttcggccatcgacgtgctgtacgaagccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaggccgacaagaaaggcaagcag
aagaaagtcgccgatccatcggtgctggaagtgctcaagccgatcgtttacgagcagcgt
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgttgaaaccgccgccgaagccgacatgggtctggtctac
ggtatcggtttccctccattccgtggcggtgcactgcgctacatcgactcgatcggtgtt
gccgagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcgaagctgcgcgaaatggccaaaaacggccagagcttcttcggttaa
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