Pseudomonas graminis: FX982_03119
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Entry
FX982_03119 CDS
T06934
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
pgg
Pseudomonas graminis
Pathway
pgg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
FX982_03119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_03119
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
FX982_03119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Apo-CII
DDRGK
Motif
Other DBs
NCBI-ProteinID:
QKF52138
UniProt:
A0A6M8MTP2
LinkDB
All DBs
Position
3495057..3495974
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AA seq
305 aa
AA seq
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MPRAIWKGAISFGLVHIPVALVSATSRQGVDFDWLDKRSMDPVGYKRINKVSGKEINKEN
IVKGVQYEKGRYVVISEDEIRSAHPKSTQTIDIFGFVDSDQIPLQHIDTPYFLAPDKRGE
KVYALLRQALVDTGKVALAHVVIRTSQHLAAVMPLDSAIVLVLLRWPSEVRGLDSLELPK
EATDVKLSKSELDMAKRLIKDMSTEWTPDAEEYRDTFQDQIMSLVETKAREGKIENVETD
AGDTERKSADVIDLTELLKRSLGGRSGAAKAPAKAKPASKSKAESKDDAPAKRRAPPRKK
TTKAS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggcaatctggaaaggcgcgatcagttttgggctggtgcatattcctgtggcg
ctggtgtcggcgacgtcgcggcaaggtgtcgacttcgactggctggacaaacgcagcatg
gacccggtcggttacaagcgcatcaacaaggtctccggcaaggagatcaataaagaaaac
atcgtcaaaggcgtgcagtacgagaaggggcgctacgtcgttatcagcgaggacgagatt
cgctcggcgcacccgaaatcgacccagaccatcgacattttcggtttcgtcgacagcgac
cagattccgctccagcacatcgacacgccgtacttccttgcccccgacaagcgcggcgag
aaggtgtatgccctgttgcggcaagcgctggtcgacaccggcaaggtggcgctggcccat
gtggtgattcgcaccagtcagcacctggcggcggtgatgccgctcgactctgcgatcgta
ctcgtactgttgcgctggccctcggaagtgcgcgggctcgacagcctcgagctgcccaag
gaggccactgacgtcaagctcagcaaaagtgagctggacatggccaagcggctgatcaag
gacatgagcaccgagtggacgccggacgccgaagagtaccgcgacaccttccaggaccag
atcatgtcgctggtggaaaccaaggcccgcgaaggcaagatcgagaatgtggagacagac
gccggcgacaccgagcgtaagtcggcggacgtcatcgacctgaccgagctgctcaagcgc
agcctgggcgggcgcagtggtgcggccaaggcgcctgcaaaagccaaaccggccagcaag
agcaaagccgagtccaaggacgatgcgccagcgaaacgccgtgcgccgccccggaagaag
accaccaaggcctcttga
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