Panacibacter ginsenosidivorans: FRZ67_07995
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Entry
FRZ67_07995 CDS
T06131
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pgin
Panacibacter ginsenosidivorans
Pathway
pgin00260
Glycine, serine and threonine metabolism
pgin00630
Glyoxylate and dicarboxylate metabolism
pgin00785
Lipoic acid metabolism
pgin01100
Metabolic pathways
pgin01110
Biosynthesis of secondary metabolites
pgin01200
Carbon metabolism
Module
pgin_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pgin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FRZ67_07995 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRZ67_07995 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
FRZ67_07995 (gcvP)
Enzymes [BR:
pgin01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
FRZ67_07995 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QEC67238
UniProt:
A0A5B8VAA4
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Position
complement(1923325..1926192)
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AA seq
955 aa
AA seq
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MNLFEKQASEFIPRHIGPGASDTKEMLKTIGLNSLEELISDTVPAAIRMQRPLNLPEAIS
ENEYLKLIKEMSLKNKVYKNYIGQGYYDTITPSVILRNVFENPGWYTQYTPYQAEISQGR
LESLLNFQTMVSDLTALPIANASLLDEATAAAEAMAMIFHHVNKTDRVERPKFFVDNEIF
PQTKDVLVTRATPIAVELVYGNYATALIDTSYCGAIVQYPNDKGSIEDYRGFVNKVHDAG
GHVVMATDLLALTLLTPPGELGADVAVGSAQRFGVPLGFGGPHAAFFAAKDEFKRNLPGR
IIGVSIDAQGNRALRMALQTREQHIKREKATSNICTAQALLANMAAMYAVFHGPLGLKSI
AERIAILTQTVAEAIEERGFELVSDNYFDTITVRVDNIKAIREKAERQQINLRYINNNLI
GISIDETVTVDDLYDLINCFENDVDPVAFDIEEDDEPRHIPLNLARTSSYLTHPVFNIYR
SESQVMRYIKQLENKDLSLNTSMISLGSCTMKLNAASEMIPLSWSHWAKMHPFAPVDQTA
GYQQMIKELSDYLCEITAFDACSLQPNSGAQGEYAGLLTIKAYHESRGDHHRNVMLIPIS
AHGTNPASAVMAGMKVVVVKALENGYIDVEDLKAKAAQHADNLSGIMITYPSTYGVYEET
VKEITAIIHEQGGQVYMDGANMNAQVGLTAPGLIGADVCHLNLHKTFAIPHGGGGPGMGP
ICCAKHLAPFLPGHVNEQTSNAVSAAPYGSASILLISYGYIRMLGATGVKAATEYAILNA
NYMRARLEKHFDILYTNHNGECAHEFIVDLRPFKKSAEVEAEDVAKRLMDYGFHAPTMSF
PVAGTIMIEPTESEDKAELDRFCDALIRIREEIKTIEDGTADKRDNALKNAPHTQAVVCA
NEWNHAYTRQEAAFPLYYVTQNKFWPSVARINNTHGDRNLICTCEPVSSYAEAEA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattcgaaaaacaagcttccgaatttataccaaggcatattggcccaggtgcg
tcagacacaaaagaaatgctgaagacaattggcttgaacagcctggaagaactgatcagt
gatacggttcctgccgctatccgcatgcagcgcccattgaatttaccggaggcaattagt
gaaaatgaatacctgaaactcattaaagaaatgagtttgaagaacaaggtttacaagaac
tatatcgggcagggttattatgatacgatcacgccttctgtaattcttcgcaatgttttt
gaaaacccgggatggtacacacaatacacaccttaccaggccgagatttcgcagggccgt
ttggaaagcctgttaaattttcagaccatggtaagtgatcttacggctttgcccattgca
aatgcatctttattagacgaagccactgcagcagcagaagcaatggcaatgatctttcat
catgtaaataaaacagacagggtagaaaggccaaaattttttgtagacaacgaaattttt
ccgcagacaaaagatgtgttggtaacaagagcaacgccaatagccgttgaactggtatat
ggtaattacgccactgcgttgatcgatacaagttattgtggtgccattgtgcaatatcca
aatgataaaggctctattgaagattatcgtggctttgtgaataaagtgcatgatgcaggc
ggacatgtagtgatggcaacagatctgttagcattaacattattgacccccccaggagaa
ttgggtgctgatgttgcagttggttctgcgcaacgttttggtgtgcctttaggttttggt
ggtcctcatgcggcattctttgctgcaaaagatgaattcaaaagaaatctccccggaaga
ataattggtgtaagcatagatgcgcaaggcaatcgtgcattgcgtatggcattgcaaaca
agagagcaacatattaaacgcgaaaaagcaacatccaatatttgcactgcgcaggcattg
ctggctaacatggcggccatgtatgcggtatttcatggtccgcttggattgaaatcaata
gcggaacgtattgcaatacttacacaaacggtggcggaagcaattgaagaaagaggcttt
gagctggtatcagataattattttgataccatcacggtaagggttgataatataaaagcg
atcagggaaaaagcagaaagacaacagatcaatttaagatatattaataacaaccttatt
ggtatttcaattgatgaaacagtaacagtagatgatctgtatgatctgatcaattgtttt
gagaacgatgttgatcctgttgcattcgatattgaagaagatgatgaaccaaggcatatt
cctttgaatcttgcacgcacttcttcttatttaacgcaccccgtgtttaacatttaccgc
agtgaaagccaggtaatgcgttatatcaaacaattagaaaataaagatctttcgttaaat
acttcgatgatctcactcggttcctgcactatgaaattaaatgcagccagtgagatgatc
ccattaagctggagccattgggctaagatgcatccgtttgcacctgttgatcaaactgcg
ggttaccagcaaatgataaaagagttaagtgattatctctgcgagatcaccgcatttgat
gcatgcagtttacaacccaacagtggtgcgcagggtgagtatgcaggattgcttactatt
aaagcatatcatgaaagtcgtggcgatcatcatcgtaatgtaatgctgattccaatttct
gcgcatggtaccaatcctgcaagtgcagtaatggcgggtatgaaagtggttgtagtaaaa
gcattagagaatggatacattgatgttgaagacctgaaagcaaaagctgcacaacatgcg
gacaatctttccggcatcatgatcacttacccgagtacgtatggtgtgtatgaagaaacc
gtaaaagaaattactgctattattcatgaacaaggtggccaggtgtatatggacggtgca
aacatgaatgcccaggttgggttaacagcacctggtttaattggtgcggatgtttgtcat
cttaacctgcataaaacatttgctattccgcatggtggtggtggtccgggtatggggcct
atctgctgcgcaaaacatcttgctccgtttttgcctggtcatgttaatgaacaaacttca
aatgctgtaagtgctgcgccatatggttctgcatctattttattaatttcttacggatat
attcgtatgcttggtgcaacgggcgtaaaagctgcgactgaatatgcaatactcaacgca
aattatatgcgtgctcgtttggaaaaacattttgatattctctacacaaaccacaacgga
gagtgtgcgcatgaattcattgttgatcttcgccctttcaaaaagagtgcagaggtagaa
gcagaagatgtggccaagcgtttaatggattatggttttcatgcgccaaccatgagcttc
cctgttgccggcacaatcatgatagagccaacggaaagtgaagacaaggcagaattggat
cgcttctgcgatgcgctcatcaggatacgtgaagaaataaagaccattgaagatggcact
gcagataagagagataatgcattaaaaaatgcaccgcatacacaagccgttgtttgtgcc
aacgaatggaaccacgcatatacaagacaggaagctgcattcccgctgtattatgtaacg
caaaataaattctggccttccgttgcaaggatcaacaatacgcacggagacagaaatctt
atctgtacctgcgaacctgtaagttcttatgcagaagcagaagcataa
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