Pedobacter gandavensis: QG516_18280
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Entry
QG516_18280 CDS
T09013
Name
(GenBank) outer membrane beta-barrel protein
Organism
pgj
Pedobacter gandavensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl_3
TonB_dep_Rec
CarbopepD_reg_2
CarboxypepD_reg
Plug
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
WGQ08485
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Position
4340089..4342872
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AA seq
927 aa
AA seq
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MKSQLHLKKALITVLFVIIGSTVFAQTGKISGKVSDKKTGETLIGVTVKIAGTTKGSSTD
VEGRYIINGLAAGKYIVETSYIGYTTKRITDIEVKATGSTSIDFVLDESSSNNLNEVVIS
ASASKESVNTLFANQKASISISSGISAELIRKSPDKNTSEVLKRVSGASIQDNKFVIVRG
LSDRYNSAMLNNSMLPNTEVDKRAFSFDILPSNLIDAIVINKTASADIPADFSGGVVQIT
TKDFPDNPFLNLSLGTSINMQSAFKDFYVAPRGGLEALGIYDKGRDIPKGFPSTDVFRAL
EPNSAERFDLSRQFKNNWGYNKVTAKLGPIFQLNYGTSKVYKDDSKFGTVLSLTYRYDER
LKTSDQKAYTGQALGDQFHDNQYNFNTNIGALANFAYSWGTNKITLKNIYNRVLENQFTI
REGKDDAGGEFLRTGDYLLQRSLLSNQLTGEHLLTQDSKIKMDWNLNYANTDRKEPGYKR
MEYSKDGVAAIQPASADARLAGNFNSKLNEDAYGGALNFTIPVSWFQDKNKIKFGYFGQY
RKRDFNARILGLIRNGDFDNSLLTLPQDQIFAPENIRPNGFVYDEITNGGDHYDASAFLN
AGYAMFDGYLTEKIRFSVGARLESYQLKLNSVDNGKPVKIDSTTTNLLPSANLIYNLTDK
ADIRVSASQTVGRAEFRELAPFPFYDFNKNMNIRGNANLKQSKTTNLDLGYAYYPASGET
FSVSTFYKYFELPIEQTLQLGNSGRSLSYANSESATVYGIELEFRKSLKFIGEQFNNFTF
NTNASYIKSEVVVSKLVNAKGVRPMQGQSPYLINAGLTYNNTAANTLGVTLLYNRVGPRI
WAIGNIEDPDIYEYSRNVLDLQISKKFAKSRAEVKLNYSDILNNKAYYYQKVKGSDPNAS
FDKKTDNVNIADRFGSSVSIGFSYKIK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcacaactacatctcaaaaaggcattaattaccgttttattcgtaattattggc
agcacagtgtttgctcaaaccggcaaaatttctggtaaagtatctgataaaaaaacaggg
gaaacactgattggtgtgactgttaaaattgcaggtaccacaaaaggatcatcaacggat
gtggaaggaagatacatcatcaacggcctggccgctgggaaatatattgtagaaacttct
tatatcggttacacgacaaaaagaatcactgatattgaagtgaaagcaactggttctacc
agtatagattttgtattagacgaatcttcttctaacaacttaaacgaggttgtgatttct
gcaagcgcaagtaaggaatctgtgaacacgctatttgccaatcagaaagcgagtattagt
atctccagtggaatctctgcagagctgatcagaaaaagcccggataagaatacttcagag
gtgttgaaacgtgtgagtggtgccagtatccaagacaacaaatttgtgattgttcgtgga
ttgtctgatcgctataactcagcaatgctgaacaactctatgcttccaaatacggaagta
gataaaagagcattttcttttgatatccttccttcgaatttaatcgatgccattgtgatc
aacaaaactgcatccgcagatattccagcagatttttctggtggtgttgtacaaatcaca
actaaagactttcctgataaccctttcctgaatttatcgttaggaacatcgatcaatatg
cagtcggcgtttaaagacttttatgtagcaccaagaggtggtctggaagctttagggatt
tatgataaaggaagagatattccaaaaggcttcccatctacagatgtgttcagagcgctg
gaaccgaattcggcagaaaggtttgatttatccagacaattcaaaaacaactggggttat
aacaaagtaaccgctaaactggggccgatctttcaattaaattacggtacaagtaaagtg
tataaagacgattctaaattcggaacggtattgtcattaacttatagatatgatgagaga
ttgaaaacttctgaccagaaggcttataccggacaggccttgggtgatcagtttcatgac
aatcaatataactttaacaccaatatcggtgctttagccaactttgcttactcttggggt
accaataaaattaccctaaaaaacatctataacagggtgcttgaaaatcaatttaccatc
cgtgaaggtaaagatgatgctggtggggaatttcttagaaccggtgattacttattgcag
cgctctttactgagcaaccagttaactggtgagcatttattaacacaagatagtaaaatc
aaaatggactggaatctgaactatgcgaatacggatagaaaagagcctggttacaagcgt
atggaatattctaaagatggggtagctgcgattcaaccggcttcagctgatgccagactt
gcaggtaacttcaactctaaactgaatgaggatgcatatggtggggccttaaactttact
attccagtttcctggttccaggataagaacaaaattaaattcggttattttggtcagtac
agaaagcgtgatttcaatgcaagaattttgggtctgattagaaacggtgattttgacaac
tcattactgactttaccgcaggatcagatttttgctccagaaaatattcgtccgaatgga
tttgtatatgatgagattaccaacggtggagatcattatgatgcaagtgcatttctgaat
gctggttatgcgatgtttgatggttacctgactgagaaaataagatttagtgttggtgca
agattagagtcttaccaattgaaattgaatagtgtagacaatggtaaacctgtgaaaatt
gattcaactacaacaaacttattgccatctgccaacctgatctacaatttaactgataaa
gcggatatccgtgtttctgcttcccaaacagttggacgtgcagaattcagagagcttgct
cctttccctttttatgatttcaataaaaacatgaacatcaggggtaatgctaatttaaaa
caatcaaaaactaccaatctggatttaggttatgcctattaccctgcttcaggagaaacc
ttctcagtatctactttctataagtacttcgaattgccgatagagcagactttgcaattg
ggaaattcgggtaggtcattgagctatgccaattctgaatctgctacagtatatggtata
gaactggaatttagaaaatcattgaaattcattggtgagcaattcaacaactttactttc
aataccaatgcttcttatatcaagtcggaagtagtagtttctaaattggtgaacgcaaaa
ggcgttagaccaatgcagggacagtctccatacctgatcaatgcaggccttacttataac
aatactgctgcaaatactctgggtgtgactttattgtacaacagggtaggtccacgcatc
tgggcaatcggtaacatagaagatcctgatatttatgagtattcaagaaatgtactggat
cttcagatttctaagaagtttgccaagtccagagcagaggtaaagctgaactacagtgat
attttgaataacaaagcttattactaccaaaaagtaaaaggttctgatccaaatgcatca
ttcgacaagaaaactgataatgtgaacattgcagaccgttttggttcttcagtatctatt
ggcttctcttacaaaatcaaatag
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