Paraburkholderia graminis: CUJ91_29730
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Entry
CUJ91_29730 CDS
T05548
Name
(GenBank) glycogen debranching protein
Organism
pgp
Paraburkholderia graminis
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Gene cluster
GFIT
Motif
Pfam:
GDE_C
GDE_N
Glyco_hydro_100
Motif
Other DBs
NCBI-ProteinID:
AXF11983
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Position
PHS1_B:complement(2592858..2594825)
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AA seq
655 aa
AA seq
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MTRIERPFDMPRLEDEWLEADGFGGFASGTVGTERTRRYHALLLAATRAPGGRVVLVNGV
EAWLEADGERYPLSMQRYMPDLLYPDASANLLAFGTEPWPTWRFQFNAQIVITAEVFVSK
ATCETVLRWQWERPQAATPTGALTLKVRPLLSGRDYHALHHENAAFNFGAQISDDARNVS
WQPYGDLPRIHAATNGSYAHAPDWYRNFCYVRERERGLDFSEDLATPGVFSFNLADEQAV
MILSASDATQTHVTASRQAETLAETEQQRREAFGSRLQRSADAYVVQRNEGRTILAGFPW
FTDWGRDTFIAMRGLLIASGRLDAAEAILLEWAGTLSEGMLPNRFPDYGDTPEYNSVDAS
LWFIVAVHDYLSTDHAGAATRARLQAAADAILAGYTQGTRFNIKASAEDGLLCAGVAGMQ
LTWMDAKVGDWVVTPRIGKPVEVQALWINALRIAATWNAQWQQPADRAWQAFRERFVDPS
TQALFDNIDVDHVSGTVDRAIRPNQIFAVGGLPLPLLEGAAARAVVDQVEAQLLTPLGLR
TLAPSDPAYRGRYSGAPYERDGAYHQGTAWPWLLGPFVEAWLRVRGNTDETRREARTRFL
DPLYAHLDHAGLDHLSEIADGDLPHAPAGTPWQAWSLGELLRVEHLLAGLDRHIA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcattgaacgacctttcgacatgccgcggctcgaagacgaatggctcgaggca
gacggcttcggcggcttcgcgtcggggaccgtgggcaccgagcgcacgcgccgctatcac
gcattgctgctggcggccacgcgcgcgccaggcgggcgcgtcgtgctggtcaacggcgtg
gaagcctggctcgaagcggacggcgagcgctatccgctcagcatgcagcgctacatgccc
gacctgctgtatcccgatgcgagcgcgaatctgctggcgttcggcacggagccgtggccg
acgtggcgctttcagttcaatgcgcagatcgtcatcacggccgaagtgttcgtcagcaag
gcgacgtgcgaaacggtattgcgctggcaatgggaacgtccgcaagcggcgacgccaaca
ggcgcgcttacgctgaaggtcaggccgttgctgtccggccgcgactatcacgcgctgcat
cacgagaacgcggcgttcaactttggcgcgcaaatcagcgacgacgcgcgcaacgtaagc
tggcaaccctacggcgatctgccgcgcattcatgccgcgacgaatggcagctacgcgcac
gcgccggactggtatcgcaacttctgctacgttcgcgagcgcgagcgcggcctggatttc
agcgaagacctcgcgacccccggcgtattcagcttcaatctcgcggatgagcaagcggtc
atgattctcagcgcatcggatgcgacacaaacacacgtaaccgcatcgcgccaagcagaa
accctcgccgaaaccgaacaacaacgccgcgaagcattcggctcgcgcctgcaacgttcc
gccgacgcctacgtcgtccagcgtaacgagggccgcacgatactcgcgggcttcccgtgg
ttcaccgattggggccgcgacacgttcatcgccatgcgcggcttgctgatcgcgtcgggc
cgtctggatgccgccgaggcgatcctgctcgaatgggcgggcacgttgtccgagggcatg
ctgcccaatcgtttccccgattacggcgacacgcccgaatacaattccgtcgatgcgtcg
ctgtggttcatcgtcgccgtgcacgactatctgtcgacggatcacgcgggcgcggcaacc
agggcgcgtctccaggccgccgctgacgcgatcctcgcgggctatacgcaaggcacgcgc
tttaacatcaaggcatcggcggaggacggtttgttgtgcgcgggcgtcgcaggcatgcag
ctcacgtggatggacgcgaaggtcggcgactgggtggtgacgccgcgcatcggcaagccg
gtcgaagtgcaggcactgtggatcaacgcattgcgcattgcagcaacgtggaatgcgcaa
tggcaacaaccggccgaccgcgcatggcaggcgttccgcgagcgtttcgtcgacccgtcg
acacaggcgcttttcgataacatcgacgtcgatcatgtcagcggcacagtggaccgcgcg
attcgtccgaatcagattttcgcggtcggcgggctgccgttgccgttgctcgaaggcgcg
gcggcgcgcgccgtggtcgatcaggtcgaagcgcaattgctgacgccgctcggcttgcgc
acgcttgcgccgtcggacccggcttatcgcggccgctacagcggcgccccttacgaacgc
gacggcgcctatcatcagggcacggcgtggccgtggctgctcggtccattcgtcgaagcg
tggctgcgcgtgcgcggcaacactgacgaaacgcgccgcgaagctcgaacgcgttttctc
gatccgctgtatgcgcatctcgatcacgcggggctcgatcacctttccgaaatcgccgac
ggcgatttgccgcacgcgcccgccggcacgccgtggcaggcgtggtcgctcggcgaattg
ctgcgcgtcgagcatttgcttgccgggttggatcgccacatcgcgtaa
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