Pseudomonas glycinae: AWU82_07005
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Entry
AWU82_07005 CDS
T06994
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pgy
Pseudomonas glycinae
Pathway
pgy02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pgy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AWU82_07005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgy02044
]
AWU82_07005
Secretion system [BR:
pgy02044
]
Type VI secretion system
Imp/Vas secretion system core components
AWU82_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
AMQ83056
LinkDB
All DBs
Position
4838252..4839727
Genome browser
AA seq
491 aa
AA seq
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MSTSAAQQNAAENGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKENVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaacagaacgccgcagaaaacggcgagtacagcattctcgac
agcatcatcgccgaaacccgcctgacgccggacgacgaagcctacgacatcgccaagcgc
ggtgtgtcggcgttcatcgaagagctgctcaagccgcagaacaacggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gaaatcctgcaccacccggacttccaggccctggaatcgtcgtggcgtggcctgcaactg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgcttgacgatttcgaagactcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagccggttggcgcgatcattgcc
aactactacatgtccccaagctcgccggacgtgaagctgatgcagtacgtgtccagcgta
gcctgcatgtcccacgcgccgttcatcgccgccgccggcccgaaattcttcggcctggaa
agcttcaccggtctgccggacctgaaggatctgaaagatcacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacctccgaagactcccgctacgttggcctgaccgtgccg
cgtttcctgctgcgtaacccgtacgacccggaagagaacccggtcaaatcgttcgtgtac
aaggaaaacgttgccaacagccacgagcactacctgtggggcaacaccgcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggccca
cagagcggtggcgcggttgaagacctgcctctgcaccacttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaggttctggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatctccctgaccatgcgtaaaggctccgacaacgcggcgttcttctccgcg
agctcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggccgcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcctggctcactac
ctgaaagtgctgcagcgcgagcaactcggttcgtggaaagagcggaccgacctcgagctg
gaactgaacaagtggatccgccagtacgtggccgaccaggaaaacccgagcgccgaagtg
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtcagcctgaacgtgcgtccgcacttcaagtacatgggggccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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