Pseudoalteromonas translucida TAC125: PSHAa1029
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Entry
PSHAa1029 CDS
T00282
Symbol
holA
Name
(GenBank) Putative DNA polymerase III, delta subunit, probably ATP hydrolase
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pha
Pseudoalteromonas translucida TAC125
Pathway
pha03030
DNA replication
pha03430
Mismatch repair
pha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSHAa1029 (holA)
03430 Mismatch repair
PSHAa1029 (holA)
03440 Homologous recombination
PSHAa1029 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pha03032
]
PSHAa1029 (holA)
03400 DNA repair and recombination proteins [BR:
pha03400
]
PSHAa1029 (holA)
Enzymes [BR:
pha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSHAa1029 (holA)
DNA replication proteins [BR:
pha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSHAa1029 (holA)
DNA repair and recombination proteins [BR:
pha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSHAa1029 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
CAI86107
UniProt:
Q3IJ95
LinkDB
All DBs
Position
I:complement(1064793..1065830)
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AA seq
345 aa
AA seq
DB search
MRCYANQLPSELKKGLKPFYLVFGEEPFQEAQCVQQIRAIAKEQGFDEVIKFTLMQGFDW
QEIIAQYQSMSLFSARTIIELDLNQQKPGIIGSNTFKKIIELINPDTILIIKGAKASQDV
QRSAWFKALDKHGLFVPCYPLTGTHVKRWLDEQCQRLSLNMQNEAKLSLISATEGNLLAC
FQELEKLSLLHANALITQQLVMQGLLNQAKFDIFDLSDALLNGQAKQAIKVLNKLASDNT
EVVSILWAITKELNTLIDVQIGLLNGEPIANLFKQKAIWKNQQAPVQSAINRLSIHTLEQ
ISSELAIFDASYKQGNLIAPYQALAHICIKFCQPLNISLPCHPVN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgttacgctaatcaattaccgagtgaactaaaaaaaggcttaaaacccttttac
ttagtgtttggtgaagagccttttcaagaagcgcaatgtgtacaacaaattcgcgcaatt
gctaaagagcaaggctttgatgaagtaattaaatttactttaatgcaaggttttgattgg
caagaaattatagctcaatatcaaagtatgtcgctgtttagcgcccgcactattattgag
cttgatttaaaccagcaaaagccaggaattattggcagcaacacgtttaaaaaaattatt
gagctaataaaccccgataccattttaattattaaaggcgctaaagccagccaagacgta
caacgcagtgcttggtttaaagcgcttgataaacacggtttatttgtaccttgctatccg
cttaccggtacgcatgtaaagcgttggttagatgagcaatgccagcgtttatctcttaat
atgcaaaatgaggcaaagctgagtttaattagcgccactgaaggtaatttactggcgtgt
tttcaagaactcgaaaaactctcattactacacgccaatgcgctcattacacaacaatta
gtaatgcaagggctattaaatcaagccaagtttgatatttttgatttaagcgacgcacta
ttaaacggccaagctaaacaagcaataaaagtgctgaataaactggccagcgataacacc
gaagtggtgagtattttatgggcaataaccaaggagcttaacaccttaattgatgtgcaa
attggtttacttaatggcgagcccattgctaatttatttaagcaaaaagcaatatggaaa
aaccaacaagcgccagtacaaagtgctataaacaggttaagtattcatacccttgagcaa
attagctctgagcttgcaatatttgacgccagctacaaacaaggtaacttaattgcgccc
tatcaagcactcgcgcatatttgtattaagttttgccaaccgctgaatatttcgctgcca
tgtcatcctgttaattaa
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