Phenylobacterium sp. HYN0004: HYN04_04820
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Entry
HYN04_04820 CDS
T05485
Gene name
gatB
Definition
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
phb
Phenylobacterium sp. HYN0004
Pathway
phb00970
Aminoacyl-tRNA biosynthesis
phb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HYN04_04820 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
phb03029
]
HYN04_04820 (gatB)
Enzymes [BR:
phb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
HYN04_04820 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
HYN04_04820 (gatB)
Mitochondrial biogenesis [BR:
phb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HYN04_04820 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF3104
Motif
Other DBs
NCBI-ProteinID:
AWM77142
UniProt:
A0A2Z3HPD4
LinkDB
All DBs
Position
998594..1000054
Genome map
AA seq
486 aa
AA seq
DB search
MSETSKLIQGRTGPWEIVLGLEVHAQVASNAKLFSGAAVGFGAGPNAQVSLVDAAMPGML
PVLNRYCVEQAVRTGLGLKAKINLTSRFDRKNYFYPDLPQGYQISQFKDPIVGEGEVLVE
RDDGSTFTVGIERLHLEQDAGKSLHDQDPNATYVDLNRAGTALMEIVSRPDMRSSEEAAA
YVKKLRTILVYLGSCDGDMEKGNLRADVNVSVRRPGEGLGTRCEIKNVNSYRFIQQAIEY
EARRQIEILEDGGKIDQETRLFDPVKGETRSMRSKEDAHDYRYFPDPDLLPLELDPAWVK
SIEDSLPELPDAKKARFQSQYGLTAYDAGVLISEQARADYYEAAAAGRDAKLVANWVTND
LAARLTAAGTPISESPIAPDEISELVALIEEGVISSKIAKDVFERMWAGEGRPRAVVEAQ
GLQQVSDTGALEALVDQLIADNPGQAAAVRDKPQAIGWFVGQVMKATGGKANPGSVNQIL
KAKLGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacatccaaactgatccagggccggaccggtccgtgggaaatcgtgctgggc
ctggaggtccacgcccaggtcgcctccaacgccaagctcttctcgggcgcggccgtcggc
ttcggcgcaggccccaacgcccaggtcagcctggtggacgccgccatgcccggcatgctg
ccggtcctgaaccgctactgcgtcgagcaggcggtgcgcaccggcctgggcctgaaggcc
aagatcaacctgaccagccgcttcgaccggaagaactatttctatccggacctgccccag
ggctaccagatcagccagttcaaggaccccatcgtcggcgagggcgaggtgctggtcgag
cgcgacgacggctcgaccttcacggtcggcatcgagcgccttcacctggagcaggacgcg
ggcaagagcctgcacgatcaggatcccaacgccacctacgtggacctgaaccgcgccggc
acggccctgatggagatcgtctcccgcccggacatgcgttcgtccgaggaggccgccgcc
tacgtcaagaagctgcggaccatcctggtctacctgggcagctgcgacggcgacatggag
aagggcaacctgcgggcggacgtgaacgtctcggtgcgccgcccgggcgagggcctgggg
acgcgctgcgagatcaagaacgtcaactcctaccgcttcatccagcaggccatcgagtac
gaggcccgccggcagattgagatccttgaggacggcgggaagatcgaccaggagacccgc
ctgttcgacccggtgaagggtgagacccggtccatgcgctccaaggaggacgcgcacgac
taccgctacttccccgaccccgacctcctgccccttgagctggacccggcctgggtcaag
tccatcgaggacagccttccggaactgccggacgccaagaaggcccggttccagagccag
tacggcctgaccgcctacgatgccggcgtgctgatcagcgagcaggcgagggcggactac
tatgaggccgccgccgcgggccgtgacgccaagctggtggccaactgggtgaccaacgac
ctggccgcccgcctgacggccgccggcacgcccatctccgaaagccccatcgccccggac
gagatttccgagctggtcgcccttatcgaggagggggtcatctcctccaagatcgccaag
gacgtcttcgagcgcatgtgggcgggcgagggccggccgcgcgccgtcgtcgaggcgcag
gggctgcagcaggtgtccgacaccggcgccctcgaggccctggtggaccagctgatcgcg
gacaatcccggccaggccgccgccgtgcgcgacaagccccaggccatcggctggttcgtc
ggccaggtgatgaaggccacgggcggcaaggccaatcccgggtcggtcaaccagatcctg
aaggcgaagctcgggctctga
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