Phenylobacterium parvum: HYN04_11525
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Entry
HYN04_11525 CDS
T05485
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
phb
Phenylobacterium parvum
Pathway
phb00300
Lysine biosynthesis
phb01100
Metabolic pathways
phb01120
Microbial metabolism in diverse environments
phb01230
Biosynthesis of amino acids
Module
phb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYN04_11525
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phb01002
]
HYN04_11525
Enzymes [BR:
phb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
HYN04_11525
Peptidases and inhibitors [BR:
phb01002
]
Metallo peptidases
Family M20
HYN04_11525
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
AWM78323
UniProt:
A0A2Z3HPL2
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All DBs
Position
complement(2466955..2468109)
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AA seq
384 aa
AA seq
DB search
MAGIDAVELTRELIRRPSVTPADAGAMDVVEQVLAGLGFTCRRMRFGEIENLYARIGKAR
PNLCFAGHTDVVPVGDAGAWSREAFAADIVDGVLIGRGAVDMKSAIAAFAAAAAAALAEG
AVKGSLSFLITGDEEGAALDGTKRVVETLMAEGEVIDHCIVGEPTSAESFGDMVKIGRRG
SINVGVRVEGIQGHVAYPHRAANPVPVLIRLLADLQARVLDEGYADFQPSNLEVTTVDVG
NPTTNLIPAVATARLNIRFNPAHRGADLAAWIQAEADRAAEGFAGTITLTPAISGEAFLT
EQGPFTELVAGAVEAVSGQRPDLSTTGGTSDARFIRALCPVVELGLVGRTMHAVDERAPV
EEIRRLQAVYETLIQRYFAAPPSA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggccgggatcgacgccgtcgagctgacccgcgagctgatccgccgaccctccgtgacg
cccgccgacgccggggccatggacgtggtcgagcaggtcctggcgggcctgggcttcacc
tgccgccggatgcggtttggcgagatcgagaacctctacgcccggatcgggaaggcccgg
cccaacctctgcttcgccggccacaccgacgtggtgccggtgggcgacgccggggcctgg
agccgcgaggccttcgccgccgacatcgtcgacggggtgctcatcggccggggcgccgtg
gacatgaagagcgccatcgccgccttcgccgccgccgccgctgcggccctggccgagggc
gcggtgaagggctccctgtccttcctgatcaccggggacgaggagggcgcagcgctcgac
ggcaccaagcgggtggtcgagaccctgatggccgagggcgaggtcatagaccactgcatc
gtcggcgagccgaccagcgccgagagctttggcgacatggtcaagatcggccgccggggc
tcgatcaatgttggcgtccgggtggaggggatccagggccatgtggcctatccccaccgc
gcggccaatcccgtgccggtcctgatccgcctgctcgccgaccttcaggcgcgggtgctg
gacgagggatacgccgacttccagccgtcgaacctggaggtcaccacggtggacgtgggc
aatcccaccaccaacctcattcccgccgtcgccacggcgcggctgaacatccgcttcaat
cccgcccaccggggcgcggacctggccgcctggatccaggccgaggccgaccgcgccgcc
gagggctttgccgggacgatcaccctgaccccggcgatcagcggcgaggccttcctgacc
gagcaggggcccttcaccgagctggtcgccggagccgtcgaggcggtctcaggccagcga
ccggacctttcgaccacgggggggacctccgacgcccgcttcatccgcgccctgtgcccg
gtggtggagctgggcctggtgggccgcaccatgcacgccgtggacgagcgggcgccggtg
gaggagatccgccgcctgcaggccgtctacgagaccctgatccagcgctacttcgccgcc
ccgccctcggcgtag
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