Providencia heimbachae: NCTC12003_03293
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Entry
NCTC12003_03293 CDS
T05509
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
phei
Providencia heimbachae
Brite
KEGG Orthology (KO) [BR:
phei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phei03009
]
NCTC12003_03293 (rsmD)
Enzymes [BR:
phei01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NCTC12003_03293 (rsmD)
Ribosome biogenesis [BR:
phei03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC12003_03293 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
RsmJ
Methyltransf_31
Methyltr_RsmB-F
N6-adenineMlase
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
SQH14723
LinkDB
All DBs
Position
1:3587536..3588117
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AA seq
193 aa
AA seq
DB search
MAKKPQTASLGQIRIIGGTWRGRKLPVRDSEGLRPTTDRVKETLFNWLMPVIREARCLDC
YAGSGSLGFEALSRLADNVTFIELDKQNTQLLIENKARLQATHATVINNSCLSVLAQAGT
PFDVVFIDPPFRKGLLNETVQLLEKNHWLADESWIYIESEAESPLTDIPANWQLHREKIA
GQVAYRLFIRHLN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaaccacaaacagcctctttaggtcagatccgtatcattggtggaacatgg
cgtgggcgcaagctacccgtacgtgatagtgagggcttacgtccaacaacggatagagta
aaagaaaccttatttaattggctaatgcccgttattcgcgaagcacgttgccttgattgt
tacgcaggtagtggctctctcgggtttgaagccctttctcgacttgccgataatgtcact
tttattgaactcgataaacaaaatactcagcttcttattgagaacaaagctcgcttacaa
gcaactcatgccacggtgattaacaacagttgcttgtccgttttggcgcaagcaggtaca
ccttttgatgttgtttttattgatcctccttttcgtaaaggattgctcaatgaaacggtc
caattattagaaaaaaatcattggctcgctgacgaaagttggatttacattgagtcagaa
gcggagtcaccacttactgacattccagctaattggcaactccatcgtgaaaaaatagca
ggccaagttgcttaccgtctttttattcgacatttaaattag
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