Pseudomonas hydrolytica: NLY38_17245
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Entry
NLY38_17245 CDS
T08519
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phf
Pseudomonas hydrolytica
Pathway
phf00071
Fatty acid degradation
phf00280
Valine, leucine and isoleucine degradation
phf00310
Lysine degradation
phf00362
Benzoate degradation
phf00380
Tryptophan metabolism
phf00410
beta-Alanine metabolism
phf00640
Propanoate metabolism
phf00650
Butanoate metabolism
phf00907
Pinene, camphor and geraniol degradation
phf00930
Caprolactam degradation
phf01100
Metabolic pathways
phf01110
Biosynthesis of secondary metabolites
phf01120
Microbial metabolism in diverse environments
phf01200
Carbon metabolism
phf01212
Fatty acid metabolism
Module
phf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NLY38_17245 (fadB)
00650 Butanoate metabolism
NLY38_17245 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NLY38_17245 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NLY38_17245 (fadB)
00310 Lysine degradation
NLY38_17245 (fadB)
00380 Tryptophan metabolism
NLY38_17245 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NLY38_17245 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NLY38_17245 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NLY38_17245 (fadB)
00930 Caprolactam degradation
NLY38_17245 (fadB)
Enzymes [BR:
phf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NLY38_17245 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NLY38_17245 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NLY38_17245 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NLY38_17245 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTH30172
LinkDB
All DBs
Position
complement(3690559..3692706)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENKAADAL
KVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLTEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEDVVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPEAYELLKSIVVEEREVTDEDIINFMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcctccgtcgacgcgatcaaggccgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggtgccgatatcaccgaattcgtcgacaacttcaaactg
cccgacgaagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgcccaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggccggtgactaccgcgtaatgagcgagaccgccaagatcggtctgccggaa
gtcaaactgggcatctacccgggcttcggcggcaccgtgcgcctgcctcgcgtgatcggc
accgacaacgctgtcgagtggatcgcctccggtaaggaaaacaaggctgccgacgccctc
aaggtaggtgccgtcgatgccgtcgtcgcccccgccaagctcaaggaagccgcgctggat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaatgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gttgctggccaggccggcccgaactacccggctccggtcgaggcgatcaagaccattcag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccgccggcttcgtcaag
ctggccaagacctcggtcgccgagagcctgatcggtctgttcctgaacgatcaggaactg
aagaagaaggccaaacaccacgacgaaatcgcccgcgacgtgaaactggctgccgtactc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcctccaagggcaccccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctgaccgaggcctccaagctg
ctcggcaagcgcgtcgagaaaggtcgcatgaccccggcgaagatggccgaagccctcaac
gccatccgtccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaagtggaagacgtggtgcgc
gaagacgccatcctggcctccaacacctcgaccatctccatttccctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcattcgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggtggcttctccaagctgctgggcttcggtgtcgac
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatgggcccggcctacctc
tccgacgtggtcggcatcgacaccggccaccacggccgtgacgtgatggccgaaggcttc
ccggaccgcatggcggtggaaggcaagaccgctgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaggtctccgatcctgaagcttacgagctgctcaagtccatcgtggtcgaagagcgc
gaagtcaccgacgaggacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgataccgcagccgaggccgatatgggcttgatctac
ggcatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtc
gccgagttcgtcgccctggccgacaagtacgccgacctgggcgcgctgtaccacccgacc
gccaagcttcgcgaaatggccgccaagggccagaagttcttcggttaa
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