Pseudomonas hydrolytica: NLY38_18840
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Entry
NLY38_18840 CDS
T08519
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
phf
Pseudomonas hydrolytica
Pathway
phf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NLY38_18840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phf03400
]
NLY38_18840
DNA repair and recombination proteins [BR:
phf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NLY38_18840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
UTH30479
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All DBs
Position
4010553..4011404
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AA seq
283 aa
AA seq
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MPRAIWKGAISFGLVHIPVALTSATRSQGVDFDWLDKRSMEPVGYKRVNKVTGKEVGKEN
IVKGVAYEKGRYVVLSEEEIRAAHPESTQTIDIFAFVDSEQIPLQHIDTPYYLAPDRRGE
KVYALLREALSSTDKVALAHVVLHTRQHLAALMPVESALVLVMLRWPSEVRGLDSLELGS
AVTQPKLAKSELDMAKRLIKDMSDDWRPEDYQDSFQERILDLVARKAKAGKIENVERTEG
EEQRRSADVVDLTELLKRSLGGKPKPSASKGSSTRKPAKTARK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccacgagccatctggaaaggcgccatcagcttcggcctggtgcacatcccggtcgcg
ctgacgtcggccacccgctcccagggggtggacttcgactggctggacaaacgcagcatg
gagccggtgggctacaagcgggtgaacaaggtcaccggcaaggaagtcggcaaggagaac
atcgtcaagggcgtggcctacgagaagggccgctatgtggtgctcagcgaggaagagatt
cgcgccgcgcacccggaatcgacccagaccatcgacatcttcgccttcgtcgacagcgaa
cagatccccttgcagcacatcgatacgccctattacctggcccccgatcgccgcggcgag
aaggtctatgcgctgctgcgcgaggcgctgagcagtaccgacaaggtggccctggcccat
gtggtgctgcacacccgccagcatctggcggcgctgatgccggtggagtcggcgctggtg
ctggtgatgctgcgctggcccagcgaggtacgtggcctggattcgctggagctggggtcg
gcggtgacccagcccaagctggccaagagcgagctggacatggccaagcgcctgatcaag
gacatgagcgatgactggcgccccgaggactatcaggacagcttccaggaacgcatcctc
gatctggtggcgcgcaaggccaaggccggcaagatcgagaacgtcgaacgaaccgagggc
gaagagcagcgccgcagcgccgatgtcgtcgacctgaccgaactgctcaagcgcagcctc
ggcggcaagccgaaaccctcggcgagcaagggttccagcacacgcaagccggccaagacg
gcgcgcaagtaa
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