Pseudopodoces humilis (Tibetan ground-tit): 102100694
Help
Entry
102100694 CDS
T02921
Gene name
SPOP
Definition
(RefSeq) speckle type BTB/POZ protein
KO
K10523
speckle-type POZ protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102100694 (SPOP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102100694 (SPOP)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102100694 (SPOP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
BACK
Motif
Other DBs
NCBI-GeneID:
102100694
NCBI-ProteinID:
XP_005532521
LinkDB
All DBs
Position
Un
AA seq
374 aa
AA seq
DB search
MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPECRLADELGGLWENSRFTDCCLCVAGQEFKGHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVVSHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtgccgagtcccccccctccggcagagatgtccagcgggcccgtggccgag
agctggtgctacacccagatcaaggtggtgaagttctcctacatgtggaccatcaacaac
ttcagcttctgccgggaggagatgggggaggtcatcaagagctcgaccttttcctccgga
gccaacgacaagctcaagtggtgtttacgtgtcaaccccaagggcctggacgaggagagc
aaggattacctgtcgctgtacctgctgctggtcagctgccccaagagcgaggtcagggcc
aagttcaagttctccatcctcaacgccaagggagaggagaccaaggccatggagagccag
cgcgcctatcgcttcgtgcaaggcaaggactggggcttcaagaagttcatcaggagagat
ttcctgctggacgaggccaacgggctgctgccagacgacaaactgaccctgttctgtgag
gtgagcgtggtgcaggactcggtgaacatctcggggcagaacaccatgaacatggtgaag
gtgcccgagtgccgcctggccgacgagctgggcgggctctgggagaactcgcgcttcacc
gactgctgcctctgcgtggccggccaggagttcaagggccacaaagccatcctggcagcg
cgctccccggtcttcagcgccatgttcgagcacgagatggaggagagcaaaaagaaccgt
gtggagatcaacgacgtggagcccgaggtttttaaggagatgatgtgtttcatctacacc
gggaaggccccgaacctggacaagatggctgatgatctgctggcagctgctgacaagtac
gccctggagaggctgaaggtgatgtgtgaggatgctctctgcagtaacctgtccgtggag
aacgcggccgagatcctgatcctggctgacctgcacagcgcggaccagctcaaaacccag
gccgtggacttcattaattaccacgcctcggacgtgatggagacgtcgggctggaagtcc
atggtggtgtcccaccctcacctggtggccgaggcctatcgctcgctggcctcggcgcag
tgcccgttcctgggcccgccccgcaagcggctgaagcaatcctaa
Pseudopodoces humilis (Tibetan ground-tit): 102114473
Help
Entry
102114473 CDS
T02921
Gene name
SPOPL
Definition
(RefSeq) speckle type BTB/POZ protein like
KO
K10523
speckle-type POZ protein
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102114473 (SPOPL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phi04121
]
102114473 (SPOPL)
Ubiquitin system [BR:
phi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
102114473 (SPOPL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTB
MATH
Motif
Other DBs
NCBI-GeneID:
102114473
NCBI-ProteinID:
XP_005519656
LinkDB
All DBs
Position
Un
AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNTNTLK
VPECRLAEDLGNLWETTRFTDCSFYVGGQEFKAHKSVLAARSPVFNAMFEHEMEESKKNR
VEINDVDPEVFKEMMRFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCSNLSVE
NVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNQATDIMETAGWKSMI
HSHPHLVAEAFRALASAQCPQFGIPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggttcccaccccacctcctcctggggagatgtccagtggacctgtggctgaa
agctggtgttacacacaggttaaagtagtaaaattttcatacatgtggaccattaataac
ttcagtttttgccgtgaagaaatgggtgaagttttaaagagttctacattttcatcaggg
ccaaatgacaaaatgaagtggtgcctgagagtgaatccaaagggattagatgatgaaagc
aaagactacttgtcattgtatttgcttttagtcagttgtccaaaaagtgaagtcagagca
aaattcaaattttccctgctgaatgctaaaagagaagaaacaaaagcaatggaaagccaa
agagcatatcgatttgtgcaaggcaaggactgggggtttaagaaatttatccgaagagat
tttttactagatgaagctaatggtcttctaccagatgacaagcttacattattctgtgag
gtaagcgtggtccaagactcagtaaatatatcaggacagtctaatacaaacactttgaag
gtacctgaatgtcgactagcagaagatttagggaatctctgggaaacaacaagatttaca
gattgcagtttttatgtaggaggacaagaattcaaagctcataaatctgtccttgcagca
cgatctccagtttttaatgcaatgtttgaacatgaaatggaggaaagcaaaaagaatcgt
gtagaaataaatgatgtagaccctgaagtttttaaagaaatgatgagattcatttacaca
ggaaaagcaccaaaccttgaaaaaatggctgacaatttgttggcagctgcagacaaatat
gcactggaacggctgaaggtgatgtgtgaggaggcactctgtagtaacctctcggtagaa
aatgttgctgacattcttatcctcgcagatttgcacagcgctgaacagctaaaagcacaa
gcaatagactttattaacaggtgcagtgttcttagacaacttgggtgtaaagatgggaaa
aactggaatagcaaccaagcaacagacataatggaaactgcaggctggaagtccatgatc
cactcccaccctcacttagtagccgaggcctttcgcgctctggcgtctgcacagtgtcca
cagtttggcattccacgcaagcgactaaaacagtcctga
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