Pseudopodoces humilis (Tibetan ground-tit): 102104157
Help
Entry
102104157 CDS
T02921
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102104157 (PTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
102104157
NCBI-ProteinID:
XP_005522797
LinkDB
All DBs
Position
Unknown
AA seq
1442 aa
AA seq
DB search
MASAGNASEPETSSSAGGGGHPGRAARIGGGRRRRTGGNRSAAAPDREYLQRPSYCDAAF
ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLRAAN
LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPQEDGANVLTTEALRQHLE
SALQASRVHVYMYNRQWKLEHLCYKSGELITEAGYMDQIIEYLYPCLIITPLDCFWEGAK
LQSGTAYLLGKPPLQWINFDPLEFLEELKKINYQVESWEEMLNKAEVGHGYMDRPCLNPA
DPDCPITAPNKNSTKPLDVALVLSGGCYGLSRKYMHWQEELIIGGTVKNSSGKLVSAQAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRMYVEVVHQSVAQNSTQKVL
SFTTTTLDDILKSFSDVSAIRVASGYLLMLAYACLTMLRWDCAKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVTRVIQVEPQAYVENDNTCYSPPPPYSSHSFAHETQITMQST
VQLRTEYDPHTQVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSDSSIH
CLEQPCTKWTLSSFAEKHYAPFLLKPKAKIVVIFLFLGLLGLSLYGTTRVRDGLDLTDIV
PRETREYDFIAAQFKYFSFYNMYIVTQKADYPNVQHLLYELHRSFSNVAYVLLEEDRQLP
KMWLHYFRDWLQGLQDAFDSDWETGKITYNNYKNGSDDAVLAYKLLVQTGNHAKPIDISQ
LTKQRLVDADGIINPNAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRL
RIPAAEPIEYAQFPFYLNGLRETSDFVEAIEKVRAICNNYTSLGISSYPNGYPFLFWEQY
IGLRHWLLLSISVVLACTFLVCALFLLNPWTAGIIVVVLALMTVELFGMMGLIGIKLSAV
PVVILIASVGIGVEFTVHVALAFLTAIGDRNHRAVLALEHMFAPVLDGAVSTLLGVLMLA
GSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGQDRLPTPSPEPA
PGTVRFALPPGHTNNASDSSDSEYSSQTTVSGISEELHQYEATRGPGAPVHQVIVEATEN
PLFARSTVVQPEARHQPGPRLQSNPEPSTQQPWHQGRQPKREAREGPRPPPHRPRRDAFE
ISTEGHSGPSSRDRLGHKARSHSMRSPAFGAAGAAGAAYCPPITTVTASASVTVAVHPAL
HSHSSRAASFPSFEGHHEAGHAPFEDPHVPFNVRCERRNSKVEVIELQDVECEERIPGNS
SQ
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggccggtaacgcgtcggagccggagaccagcagcagcgcgggcggcggaggc
caccccggccgggcggcgagaatcggcggcgggaggcggcgaaggactggagggaatcgg
agcgccgcggcgcccgaccgggagtatctgcagcggccaagctactgcgatgcggctttc
gccttggagcagatttcaaaggggaaggcgacgggacggaaagcgccgctgtggctgcga
gcaaagtttcagagactgttgtttaaactgggctgttacattcagaaaaactgcgggaag
tttttggttgtcggcctcctgatatttggggctttcgctgtaggattaagggcagctaat
ctcgagaccaacgtggaggagctgtgggtggaagttggtggacgagtgagtcgggagtta
aattacacacggcagaagattggagaagaagccatgttcaacccccagctcatgatccag
actccacaggaagatggtgctaatgtactaacaacagaagcactacgacagcaccttgag
tctgcacttcaggccagcagagtacatgtctatatgtacaacagacagtggaaattggaa
catttatgttacaaatcaggagaactcatcacagaagcaggttacatggaccagattata
gaatatctttatccttgcttaattatcactcctttggactgcttctgggagggagcaaag
ctacaatcaggaactgcctatctattagggaagcctcctttgcagtggatcaactttgac
cccttagaattcttggaagagttaaagaaaataaactaccaagtggagagctgggaagaa
atgctgaataaagcagaggttggtcatggttatatggatcgaccctgcctgaatcctgct
gatcctgattgcccaatcacagctcccaataaaaattccaccaaacctcttgatgtagcc
cttgttttgagtggtggatgctatggactatcaaggaaatacatgcattggcaggaggag
ctgattataggtggtacagtcaagaacagttctggtaaacttgtcagtgcccaggctttg
caaaccatgtttcagttaatgacccctaagcaaatgtatgagcatttcaaggggtatgaa
tatgtttcacatatcaactggaacgaggacaaggcagcagcaattctggaagcctggcag
aggatgtatgttgaggttgttcatcaaagtgttgcacaaaactctactcagaaggtgctt
tcctttacaacgaccaccctagatgacatcttgaagtcattttctgatgtcagtgctatc
cgagtagctagtggctacttactaatgcttgcctatgcctgcttaacgatgctgcggtgg
gactgtgccaagtctcagggtgctgtggggctggcaggagtcttgttggttgcactctct
gtggctgcaggattgggcctgtgctcattgattggcatttcctttaatgctgccacaact
caggttttgccttttcttgctcttggagttggtgtagatgatgttttccttctggcacat
gcatttagtgaaacaggacagaataagagaattccgtttgaggacagaacaggtgaatgt
ctgaagcgaacaggagcaagtgtagcccttacatctatcagcaatgttactgctttcttt
atggctgccttaattcctattccagctttaagagcattttctctccaagcagcagttgtg
gtggtgttcaattttgctatggttctgctgattttccctgctatcctgagcatggacctt
tatcgtcgagaagacaggagactggacatattttgctgttttacaagcccgtgtgtcacc
agagtgattcaggttgagcctcaagcgtacgtggaaaatgacaatacttgctacagtcct
ccacccccgtacagcagccacagttttgcacatgaaactcagattacaatgcagtccaca
gtgcagttgcgcacagaatatgatcctcacacgcaggtgtactacaccacagcagagcct
cgctcagaaatatctgtgcagccagtgacagtgacacaagataatctgagctgccagagc
ccagaaagcacaagctcgacgagggatttactttcccagttttcagactccagtatacat
tgcctcgagcaaccctgtacgaagtggacactctcatcttttgcagaaaagcattatgct
ccattcctcctgaaaccaaaagctaagattgtggttatttttctttttttgggtttactt
gggctcagcctttatggaactacccgggtgagagatggactagatctcacagacattgta
ccacgggaaacacgggaatatgactttattgctgcacagttcaagtacttttcattctac
aacatgtacattgtgacacagaaagcagactatccaaatgtccagcacttactttatgaa
cttcacagaagtttcagcaacgtggcatatgtcttgttggaagaggataggcagctcccc
aagatgtggttgcactactttcgagactggctgcaaggacttcaggatgcctttgacagt
gactgggaaactgggaagatcacttacaacaactataaaaatggttctgacgatgctgtt
ctggcttacaaactcttggtacaaacaggcaaccatgcaaagcccattgacatcagccag
ttgactaaacagcgtctggtggatgcagatggaatcattaacccaaatgctttctacatc
tacctgacagcctgggttagcaacgaccctgtggcctatgctgcctcacaagccaacatt
cgcccgcaccgcccggagtgggtccacgacaaagcagactacatgccagaaacgcggctg
aggattccagcagccgagcccatagaatatgctcagtttcctttctacctcaatggattg
cgtgaaacttctgactttgtggaggctatcgagaaagtgagagctatctgtaataactac
accagcctggggatctccagctacccaaatggttacccatttctgttctgggagcagtac
attggacttcgtcactggctcctcttatccattagtgtggttttagcttgcacgtttctg
gtgtgtgccctcttcctcctaaacccctggacagctgggatcattgtggtggtgctggct
ctgatgactgtggagctgtttggcatgatgggtctgattggaataaagctgagtgcagtg
cctgtggttatcctgattgcttctgttggcattggtgtggaattcactgttcacgttgct
ttggcgtttttaactgccataggagacaggaaccatagggctgtgcttgcattggaacac
atgtttgcaccagtgctggatggggccgtgtccactctgcttggggtgttaatgcttgca
ggatcagagtttgattttattgtcaggtatttctttgctgttttggcaatcctaaccatt
ctgggagttctcaatggattggtgctgcttcctgttcttctctcattctttggaccatac
cctgaggtatctccagccaacggacaggacagattgcccacaccatctcctgagccagcc
cccggtacagtgaggtttgcactgccacctggccacacaaataatgcttcggattcctct
gattctgagtacagctctcaaaccacagtgtctggcatcagtgaagagctgcatcagtac
gaggccacacgaggccctggggcaccagtccaccaagtaatagtggaagcgactgagaat
cctctctttgcaagatccactgtggttcagccggaagcaaggcatcagccgggtcctagg
ctgcagtcgaatccagagcccagcacgcagcagccgtggcatcagggcagacagcccaaa
cgggaagcgagggaagggccgcgaccacctcctcaccgccctcgcagggacgcttttgaa
atttctaccgaagggcactcgggacccagcagcagggatcgcttgggccacaaggctcgt
tcccacagcatgagaagcccggcattcggggcggcgggcgctgcgggagctgcctactgc
ccgcctatcactactgtgactgcctcggcctcggtcactgttgctgtccaccctgccctg
cacagccacagctcccgggcagcgagcttcccgtccttcgagggacaccatgaagctggc
cacgcgccatttgaggacccccatgtgccttttaatgtgaggtgtgaaagaagaaattct
aaagtagaagtaatagaactgcaagatgttgaatgtgaggaaaggatacctggcaacagc
tcacaataa
Pseudopodoces humilis (Tibetan ground-tit): 102108629
Help
Entry
102108629 CDS
T02921
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2
KO
K11101
patched 2
Organism
phi
Pseudopodoces humilis (Tibetan ground-tit)
Pathway
phi04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
phi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102108629 (PTCH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
102108629
NCBI-ProteinID:
XP_005521152
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MPAEPPRAAPPPLRAARRKPLPEVSEGRATPLWLRARFQALLFALGCRIQRHCGKVLFVG
LLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKKD
GDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFP
CVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAE
VGQAYMERPCLDPRDPQCPPSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQQELILGGT
TKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEEKAGAILEAWQRKFVEL
AQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLMLAYACVTMLRWDCSKSQ
GAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETS
QHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMV
LFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHPG
VATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAVLLPHTDPLGSQVFAPSSSTR
DLLSQLDEAKSGRECVPLPFCRWSLADFAREKYAPLLLRTRTKVVVVVLFLALLGLSLYG
TTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGFHYPGAQAALLSLHQAF
STVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITHDSYRNGSEDGALAYKL
LIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASNDPLGFAASQANFYPPPP
EWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAIESVRAICREAAQRHGV
LSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNPWTAGIIVSILAMMAVE
LFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGSRNVRSAAALEHTFAPV
MDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVLLPVLLSVIGPPPEASQ
VDNGPCLPPPESAPPCLGPGGMYVRHTPAWPATFPEPSDTEHYTESIGPGSPRGPFIVPP
APAHILLEAGKDPSFPRITVLKPYKDSLEVQGKKEASGPQHAAPLPFGEPCTMLPREHLQ
SGPPGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPTLPGSYPNFTSSERDCL
DEPSTSGTTVPNTFEMQNMGHHGTGARR
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccg
ttgcccgaggtgagtgaggggcgagcgaccccgctgtggctgcgggcccgctttcaggcg
ctgctcttcgccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtgggg
ctgctggtgttcggggcgctggccgtgggactacgggtggcctccatcgagaccgacatc
gagcacctctgggtggaagcgggcagccgggtgagccaggagctgcgctacaccaaggag
aagctgggcgaggagtcggtctacacctcccagatgttgatccagaccccgaagaaggat
ggtgataacattctgacgcaggaggccctgcagctccacctcgaggcggccttggccgcc
agcaaggttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctacaag
tcgggtgtccccatcatcgagaacggcatgatcgagaggatgatagagaagctgttcccc
tgtgtgatcctgacaccactggactgtttctgggaaggctccaagctgcagggaggatca
gcctatctcccgggccgcccagacatccagtggagcaacctggaccctctgcagctgatg
gaggagctggggcaattcacatccctggaaggcttcaaagagctgctagacaaggcagag
gtgggacaggcttacatggagcggccctgcctggacccccgggacccccaatgtcccccc
agcgcccccaacaagcagagccagcagagccccgacatcccggccgaactctcggggggc
tgccacggcttctccaggaagttcatgcgctggcagcaggagctgattttgggcggcaca
accaaagactcccagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctc
atgagtccccggcagctctatgagcacttcaaggatgactatgagatccatgatatcagc
tggagcgaggaaaaggcaggagccatcctggaggcctggcagaggaaattcgtggagctg
gcacaggactccatccctcccaacgccacacagagtgtccatgctttctctaccaccacg
ctcaacgacatcatgaagtccttctctgacgtcagtgtcatccgggtggctgggggctac
ctcctcatgctggcctatgcctgtgtcaccatgctgcggtgggactgctccaagtcccaa
ggggctgtgggcctggcaggggtcctgcttgtggctctctccgtcgcctctggtctgggg
ctctgctcactgctgggcatctccttcaatgcagccaccacccaggtcctgcccttcctg
gccctcggcattggggtggatgacatgttcctgttggctcacgccttcaccgagacgagc
cagcacatccccttcaaggagcggacgggtgagtgtctgaagcggacagggaccagtgtg
gctctcacctctgtcagcaacatgatcgcctttttcatggcagccctggtgcccatccct
gccctgcgcgccttctccctccaggctgcagtggtggttgtgttcaacttcgccatggtg
ctctttgttttccctgctatcctgagcctggacctgcaccgccgggagaagcgccggctc
gacatcctctgctgcttctacagcccttgctcctcacgggtcatccagatccagccccaa
gagcttgccgatgccaacgacaaccatgcctgtcacccgtctccttatgggcaccccggt
gtggccaccagcacccagatcaccaccactgtgcaagccttcacccggtgtgacccctcg
ggccaccacattgtcaccgtcctaccacccacctcccaagtgtgcacctcacctgccgtc
ctcctgccccacaccgaccccttgggctcgcaggtcttcgccccatccagctccacccgg
gatctgctgtcccagctggatgaggccaagagcgggcgggagtgtgtccccctgcccttc
tgccgctggagcctcgctgattttgcccgggagaagtacgccccactccttctgcgcacc
cggaccaaggtggtagtggtggtgctgttcctggcactgctggggctgagcctctacggc
accaccatggtacatgatggcctctacctgactgacatcgtgccacgggacaccaaggca
cacgccttcatctcagcccagttcaagtacttctccttctacaacatgtttatcgtcact
aagggtggcttccactacccgggtgcccaggctgccctgctgagcctgcaccaggccttc
agcaccgtcaagtacgtggtgcgggagggcaaccgcgacctgcctaaaatgtggcttcat
tacttccaggactggctgcgagggctccaggccacctttgacagggactggcaggctggg
cgcatcacccatgacagctaccgcaatggctccgaggatggggcactggcatacaagctc
ctcatccagactggcaacaagaaggagcccttcaacttcaatcagctgaccacacggcga
ctggtggacgagaatggcatcatcccccccgacaccttctacatctgcctgactgtgtgg
gccagcaacgaccccctgggctttgctgcctcccaggccaacttctaccccccaccccct
gagtggattcatgacaagtacgacaccacgggcgagaacctgcgaatcccagcagcccag
ccgctggagttcgcccagttccctttctacctgagcgggctgcgtcgcacatctgacttt
gtggaggcgattgagagcgtacgggccatctgccgggaggctgcccagcgccacggtgtg
ctgagctaccccagtggctaccccttcctcttctgggagcagtacatcggcctgcggcac
tggttcctgctggccatcagcatcctgctggcctgcaccttcctcgtctgtgccttgctg
ctgctcaacccctggaccgccggcatcatcgtctccatcctggccatgatggctgtggaa
ttgtttggcatcatgggactgatgggcatcaagctgagcgccatccctgtggttatcctc
attgcctcggtgggcatcggtgtggagtttactgtccacgtggccctgggcttcctgaca
gctgcagggagcaggaatgtgcgctcagccgcagcactggagcacacttttgcccctgtg
atggatggtgctgtttccaccctcctcggtgtcctcatgctggctggctctgagtttgat
ttcatcatgaggtatttctttgcggtgctgaccatcctgacgctgctggggctgctcaac
gggctggtgctgctgcctgtcctgctctctgtcatcgggccaccccctgaggcatcccag
gtggataatggcccatgcctacccccaccagagtcagcacccccgtgtctgggccctggg
ggaatgtatgtccggcacactccagcctggcctgccaccttccctgagccctctgacacg
gagcactacacagagagcatagggccaggcagcccacggggacccttcattgtgccccct
gccccggcacacatcctactggaggctggcaaggaccccagcttcccccgcatcactgtc
ctgaagccctacaaggacagcctggaggttcagggaaagaaagaggcttctggccctcag
catgccgcccccctgcccttcggggagccgtgcaccatgctgccccgagagcacctgcag
tccggcccaccgggcacccggccagccccccctgcagccctgcccacctacagcacccac
ctgcagggtcccgccggcagctacaccaccgtcacggccactgcctcagtgactgtggcc
ctgcaccccacactgcctggctcctaccccaacttcaccagcagcgagcgggactgcctg
gatgagccgagcaccagcggcaccactgtgcccaacacctttgagatgcagaacatggga
caccacgggacaggtgcccggcgctag
DBGET
integrated database retrieval system