Pelagibacterium halotolerans: KKY_2423
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Entry
KKY_2423 CDS
T01645
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
phl
Pelagibacterium halotolerans
Brite
KEGG Orthology (KO) [BR:
phl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phl03021
]
KKY_2423
Transcription machinery [BR:
phl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KKY_2423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AEQ52431
UniProt:
G4R951
LinkDB
All DBs
Position
2411894..2412772
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AA seq
292 aa
AA seq
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MAQSNLPVLSSESGLNRYLQEIRKFPMLDPDEEFMLAKRYKEHSDPQAAQKLITSHLRLV
AKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPDKGFRLATYAMWWIRASIQEYVLRSW
SLVKIGTTAAQKRLFFNLRRLKGQIAALDDGSLHPDQIKQIATTLNVTEDDVVSMNQRLT
GDASLNAPMRADEGTSQWQDWLIDDVPDQEEVLGDSQEYDERMGLLEGAMEVLNDREKAI
FKARRLQESPSTLEELAQEYDVSRERIRQIEVRAFEKVQDAVKEAARSQAAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtccaatcttcctgttttaagctcggaaagcgggctcaaccgctatctgcag
gaaatccgcaagtttccaatgctcgacccggacgaggaattcatgctcgccaagcggtac
aaggagcattccgatccccaggcggcccagaagctcatcacgtcccatttacgtctcgtg
gccaagatcgccatgggctatcgcggctatggcctgcccatctccgaggtcatatccgag
ggcaacgtgggtctcatgcaggcggtcaagcgcttcgagcccgataagggcttccgtctt
gccacctacgccatgtggtggatccgcgcctcgatccaggaatatgtgttgcgctcctgg
tctctggtcaagatcggcaccaccgctgcccagaaacgcctgttcttcaatcttcggcgt
ttaaagggccagatcgcggccctcgatgatggcagcctgcaccccgaccagatcaagcag
atcgccacgaccctcaacgtaaccgaggacgatgtggtctcgatgaaccagcgcctcacc
ggcgatgcctcgctcaacgcgcccatgcgcgccgacgaaggcaccagccaatggcaggac
tggctgatcgatgacgtgcccgatcaggaagaagttctcggcgacagccaggaatatgac
gagcgcatgggcctgctcgagggcgccatggaagtgctcaacgaccgcgaaaaggccatc
tttaaggcccgccgcctgcaggaaagtccctcgaccctggaggaactggctcaggaatac
gacgtctcgcgcgagcgtatccgtcagatcgaagtccgcgctttcgaaaaggtgcaggat
gcggtcaaggaagctgcacgtagccaggccgcgcattga
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