KEGG   Pseudomonas hormoni: KJF94_03020
Entry
KJF94_03020       CDS       T09556                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
phom  Pseudomonas hormoni
Brite
KEGG Orthology (KO) [BR:phom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phom03400]
    KJF94_03020
Enzymes [BR:phom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KJF94_03020
    5.6.2.6  RNA 3'-5' helicase
     KJF94_03020
DNA repair and recombination proteins [BR:phom03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KJF94_03020
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QVW24569
LinkDB
Position
complement(660663..663149)
AA seq 828 aa
MGTSPDFTKHWFTARGWKPFAFQKQVWAAVKKGQSGLLHASTGAGKTYAVWFAALNRFAS
AVSPAEKPGKRKLLAQPLTVLWITPMRALAADTARALEEPLRDLQIPWSVGLRTGDTSSS
ERARQTRRLPSALITTPESLTLMLARADAQTALSTLRMVVVDEWHELLGNKRGVQLQLAL
ARLRRWNPELIVWGVSATLGNQAHAEQVLIPQGGGISVQGQTRKALQVDTLLPPAIERFP
WAGHIGLKMLPQVVAEVASSPSSLLFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSR
DTRDWVERALKDGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
RVSRVTLVPTHSLELIEAAAAQDAVARHRIEPRESPHKPLDVLVQHLVSMALGGGFLPDE
LYEEVRGAWAYRDLTVEDWTWALAFVRHGGLSLTAYPDYRRVEPDEQGVWRVPDARLARR
HRMSIGTIVSDASIQLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
TAYVKRSTVKKAAVPRWNGGRMPLSNELAQAVVARFSAAAQGEFVGPEMEALRPLLEVQQ
RWSGLPTENSLLAETLKSREGWHLFLFPFAGRQVHLGLASLLAWRVSQQQAVTFSIAVND
YGLELLSATSVEWSSVLNPGLLSPEQLLNDVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFEVFKQYDAGNLLLAQAGEEVLRNELDIHRLEQTLERISRLRLD
VHPVKRPTPLGFPLLVERMRESMSSEKLADRIRRMVSDLEKTAETGKA
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgggaacctcccccgacttcacaaaacactggttcaccgcccgcggctggaaaccgttc
gcctttcagaaacaggtgtgggccgccgtcaaaaaagggcaatccgggttgctgcatgcg
agcaccggtgccggtaaaacctatgcggtctggtttgccgccctcaaccgcttcgcctct
gccgtctctcccgctgaaaaacctggcaaacgaaaactgctagcccaaccgctgacagtg
ctgtggataaccccaatgcgcgccttggccgccgacaccgctcgcgcactcgaagagccg
ctgcgcgacttgcagatcccgtggagcgtaggcctgcgcactggcgacaccagcagcagc
gaacgcgcgcggcaaactcggcggttgccctccgcgctgatcaccacgccggaaagtctc
accctgatgctcgcccgtgccgacgcgcaaaccgcgctgtcgaccttgcgtatggtggtg
gtggacgaatggcacgaattactcggcaacaaacgcggcgtgcaactgcaactcgccctc
gcccgcctgcgtcggtggaatcccgagctgatcgtgtggggcgtttccgcaacgttgggt
aatcaggctcacgccgaacaggtattaatcccacagggtggtggcatcagcgttcagggc
cagacccgcaaggcgctgcaagtcgacacgctgttgccgcccgccatcgagcgttttcca
tgggccgggcatatcgggttgaagatgttgccgcaagtggttgccgaagttgcgtcgagc
cccagcagcctgctgttcaccaacacccgcgcccaatcggagatctggtatcaggcgttg
ctggaagcccgcccggattgggccgggctgattgcgctgcatcacagctcactgtcacgc
gacacccgcgactgggtcgaacgcgccctcaaggacggccagctcaaagcggtggtctgc
acctccagcctggacctcggcgtggacttcctgccagtggagcgggtgctgcagatcggc
tcggccaaaggcgtggcgcgactgatgcaacgtgccggtcgttccggtcacgcgccgggc
cgcgtgtcgcgggtgacgctggtgccgactcacagcctggagttgatcgaagccgccgcg
gcacaggacgccgtggcgcggcaccggatcgaaccccgtgaatcgccccataaacccctg
gatgtgctggttcagcatctggtcagcatggcgttgggcggtggttttttgcccgatgag
ttgtatgaagaagtccgcggagcgtgggcctaccgtgatctcacggtggaagactggacc
tgggcgctggctttcgtacgccacggtgggctttccctgacggcgtatccggattatcgc
cgcgttgaaccggatgaacagggtgtctggcgagtgccggatgcgcggttggcccgccgc
catcgcatgagcatcggcacgattgtcagcgacgcaagcatccagctgaagttctggagc
aagggcggcggaggcaaacagctgggcagcgtcgaggagggtttcatcgcacggctcaaa
ccgggcgacggttttctgtttgccggccggctgctggagttggtgcgtgtggaaaacatg
accgcttacgttaaacgcagcacagtgaagaaagccgcggtgccgcgctggaatggcggg
cggatgccactttccaacgagctggcccaagcggtggttgcccgcttcagcgctgcggcg
cagggcgagttcgtcggtccggaaatggaagcgctgcgtccgttattagaggtgcaacag
cgctggtccggattgccaaccgagaacagcctgctggctgaaacgctgaaatcccgcgag
ggttggcaccttttcctcttccccttcgccgggcgtcaggtgcatttggggctggcgagt
ctgctggcatggcgcgtcagtcagcaacaggcggtgacgttttccattgcggtcaacgat
tacggactggagttgctcagcgccaccagtgtggagtggtccagtgtcttgaaccccggc
ctgctgagtcctgagcagttattgaacgatgtactcgccagcctgaacgctggcgaactg
gcgctgcggcgctttcgggaaatcgcacggattgccgggctggtgttcgccggctacccc
ggcgcaccgaaaagtacgcgccaggttcaggcctccagcggtttgttcttcgaagtgttc
aagcaatacgacgccgggaatttgttgctggcccaggccggggaagaagtcctacgcaac
gagctggatattcatcgcctggaacagacgctggagcgcatcagtcgactcaggctcgac
gtgcatcccgtcaaacgtcctacgcccctcgggtttccgctgctggtggaacgcatgcgc
gaaagcatgagttcggaaaaactcgccgaccgtatcagacgcatggtcagcgaccttgag
aaaactgccgaaaccggaaaagcctga

DBGET integrated database retrieval system