Phaeobacter sp. LSS9: D1820_14245
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Entry
D1820_14245 CDS
T05617
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
phq
Phaeobacter sp. LSS9
Brite
KEGG Orthology (KO) [BR:
phq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phq03000
]
D1820_14245
Transcription factors [BR:
phq03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D1820_14245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Telomere_reg-2
Motif
Other DBs
NCBI-ProteinID:
AXT36035
LinkDB
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Position
complement(2989093..2989965)
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AA seq
290 aa
AA seq
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MTDPKAITTYSLFGENTELADLLHIESIEARSSLHDWSLTPHRHARLHQLLTLTQGGGLA
TLDGNEQDLHPPCMVNVPRGAVHGFQFSSDTRGWVLTLTSDLMDQVLGDSLDILTTLGRA
AVTPLRDDLLQLLTAIRDAYDADGFARTPILRGLVGAITGTVAQCIGAQQSRDANPKAHQ
LFARFETLVNRDFRARRQVSDYARELAVSTTHLNRISHQATGQSASQLINERMLREARRL
LIYTSMSAAQIAYELGYADPAHFSRVFARGTGLPPRRFRRQIITSGLPPE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgactgatccaaaggcgataaccacctactccctgtttggggagaatacagaactggcg
gatcttctgcatatcgagagcattgaggcacggtcctcgctccatgattggtcgctgacg
ccccatcgccatgcccggttgcatcagctgttgacgctgacgcaaggcggtggactggcc
acgcttgacggaaacgagcaggatcttcatcccccgtgcatggtcaatgttccccgtggc
gccgtgcatgggttccagtttagcagcgataccagaggatgggtgctgacactgacatcc
gatcttatggatcaggtgcttggggatagtctcgatattctgacaaccctaggtcgcgcg
gcggtcacaccgctacgggatgacctgctacagcttctcaccgcgatccgcgacgcctat
gacgccgacggttttgcgcgcacaccgatcctgcgtggacttgtcggcgcgatcaccggc
accgtcgcgcagtgcatcggcgcgcagcagtcgcgcgatgccaacccgaaggcgcatcaa
ctgttcgcccggttcgaaacgctggtgaacagggatttccgtgcccggcgtcaggtcagc
gactacgcgcgcgaacttgccgtttcgacaacgcacctcaatcggataagtcatcaggca
accggacagtccgcctcgcagctgatcaacgagaggatgctccgcgaggcgcgacgcctg
ctgatctatacgtccatgagtgcggcacagatcgcctatgagctcggctatgcagacccg
gctcacttcagccgggtctttgcccgcggcaccgggctgccaccacgtcgctttcgccga
caaatcattacgagcgggctgccccctgagtga
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